Apodemus sylvaticus (European woodmouse): 127683029
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Entry
127683029 CDS
T10613
Symbol
Rorc
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04659
Th17 cell differentiation
asyl04710
Circadian rhythm
asyl05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
127683029 (Rorc)
09159 Environmental adaptation
04710 Circadian rhythm
127683029 (Rorc)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
127683029 (Rorc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127683029 (Rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asyl03310
]
127683029 (Rorc)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127683029 (Rorc)
Nuclear receptors [BR:
asyl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127683029 (Rorc)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DDE_Tnp_1_7
Motif
Other DBs
NCBI-GeneID:
127683029
NCBI-ProteinID:
XP_052035844
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Position
4:complement(69349046..69375704)
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AA seq
516 aa
AA seq
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MDRAPQRHHRTSRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQQQQREQVAKTPPAGSHGADILTYTLGLSDGQLPLGASPDLPEASACPPGLLRASGA
GPPYSNTLAKTEVQGASCHLECSPERGKAEGRDSIYSTDGQLTVGRYGLRFEESRHPELG
EPEQGPDSHCSPSFCSAPEAPYASLTDIEYLVQNVCKSYRETCQLRLEDLLRQRTNLFSR
EEVTSYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIILLKAGAMEVVL
VRMCRAYNANNHTVFFEGKYGGVELFRALGCSELISSIFDFSHFLSALCFSEDEIALYTA
LVLINANRPGLQEKRRVEHLQYNLELAFHHHLCKTHRQGLLAKLPPKGKLRSLCSQHMEK
LQIFQHLHPIVVQAAFPPLYKELFSTDVEPPEGLSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccgaacgtctcgggaactgctagctgcaaagaag
acccacacctcacaaattgaagtgatcccttgcaagatctgtggggacaagtcatctggg
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgccgcagccagcaa
tgtaatgtggcctactcctgcacccgtcagcagaactgccccattgaccgaaccagccgc
aaccgatgccagcattgccgcctgcagaagtgcctggctctgggcatgtcccgagatgct
gtcaagttcggccgtatgtccaagaagcagagggacagtctacatgcagaagtgcagaag
caactgcagcagcagcagcaacgggaacaagtggccaagactcctccagctgggagccac
ggagcagacatccttacatacactctagggctctcagacgggcagctaccgctgggtgcc
tcacctgacctgcccgaggcctctgcttgtccccctggcctcctgagagcctcgggtgct
gggccaccatattctaataccttggccaaaacagaggtccaaggggcctcctgccacctt
gagtgtagtccagaacgaggcaaagctgagggcagagacagcatctacagcactgacggc
caacttactgttggaagatacggacttcgttttgaggaatccaggcatcctgagcttggg
gaaccagaacagggtccagacagccactgcagtcccagtttctgcagtgccccagaggct
ccctatgcctctctgacagacatagagtacctggtacagaatgtctgcaagtcctaccga
gagacgtgccagctgcgactggaggatcttctacggcagcgcaccaacctcttctcacgg
gaggaggtgaccagctaccagaggaagtccatgtgggagatgtgggagcgctgtgcacac
cacctcactgaggccattcagtacgtggtggagtttgccaagcggctttcaggattcatg
gagctctgccagaatgaccagatcatcctactgaaagcaggagcaatggaagtcgtccta
gtcagaatgtgcagggcctacaatgccaacaaccatacagtcttttttgaaggcaaatac
ggtggtgtggagctgtttcgagccttgggctgcagcgagctcatcagttccatattcgac
ttttcccacttcctcagcgccttgtgtttttctgaggatgagatcgccctctacacggct
ctggttctcatcaacgccaaccgtcctgggctccaagagaagaggagagtggagcatctg
caatacaatttggagctggccttccatcatcatctctgcaagacccatcgacaaggcctc
ctagccaagctgccacccaaagggaagctccggagcctgtgcagccagcacatggagaag
ctgcagatcttccagcacctccaccccatcgtggtccaagccgccttccctccgctctat
aaggaactcttcagcactgatgttgagccccctgaggggctgtcaaagtga
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