Apodemus sylvaticus (European woodmouse): 127683301
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Entry
127683301 CDS
T10613
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127683301 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127683301 (Dhx36)
03012 Translation factors [BR:
asyl03012
]
127683301 (Dhx36)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127683301 (Dhx36)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127683301 (Dhx36)
Translation factors [BR:
asyl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127683301 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
AAA_14
NPHP3_N
DUF6782
Motif
Other DBs
NCBI-GeneID:
127683301
NCBI-ProteinID:
XP_052036381
LinkDB
All DBs
Position
4:105561239..105603590
Genome browser
AA seq
1000 aa
AA seq
DB search
MSYDYHQSWSRDGGPRGSGQGSGSSGGGSRGSGGGGGGRGGRGRHPGHLKGREIGLWYAK
KQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKSDKDSEAQISWFAPEDHGYGTEV
SSEKKINSEKKLDNQEKKLLNQEKKTFRTTDKSYIDRDSEYLLQENEPNLGLDQQLLEDL
QKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNY
IERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRNQGSIL
YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLPFRSDLKVILMSAT
LNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYIPEQKEHRSQFKRGFMQGHVN
RQEKEEKENIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEED
GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVV
LSIKHLIELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKIADARRKELARETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSS
NTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRL
NLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPY
CLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIECPHPVD
WNDTKSRDCAVLSAILDLIKTQEKATPRNLPPRSQDGYYS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgactatcatcagagctggagccgcgacgggggcccacggggctccggccag
ggctccggcagcagcggcggagggagccggggctccggcggcggcggaggaggccgcggc
ggccggggccgacatcccggacaccttaagggtcgcgagatcggcctgtggtacgccaag
aagcagacgcagaagaacaaggaggctgagaggcaggagagagctgtggtgcacatggat
gaacggcgagaagagcagattgtgcagctgctaaattcagtccaagcgaagagtgataaa
gattcagaagcacagatatcctggtttgctcctgaggatcatggatatggtactgaagtt
tcttcagagaaaaaaataaactcagagaagaaacttgacaaccaggaaaagaaattgtta
aaccaagaaaaaaagacatttaggaccacagacaaatcatacattgaccgagattctgaa
tatttattgcaagaaaatgagccaaacctgggcttagatcaacaattattagaagattta
caaaagaaaaaaactgaccctcggtatatagagatgcagcgtttcagaaaaaagctgcct
tcatatggaatgcaaaaggagctggttaatttaatcaataatcatcaggtgacagtaata
agtggtgaaactggttgtggcaaaaccactcaggttacgcagttcatcttggataactac
atcgaaagaggaaaagggtctgcctgcagaatagtttgtactcaaccaagaagaattagt
gccatttcagttgctgagagagtggccgcagaaagggcggagtcttgtggcaatggtaat
agtactggataccagattcgtctccaaagtcggttgccaaggaatcaaggttctatctta
tactgcacaacaggaatcattcttcagtggctccagtcagactcacgtttgtccagtgtt
agtcatattgtacttgatgaaattcatgaaaggaatctacagtcagatgttttaatgact
gttattaaagatcttctcccttttcgatctgatctcaaagtaatattgatgagtgcaacc
ttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatatacctggg
tttacttttccagttgtggaatatcttttggaagatatcattgaaaaaataagatatatt
ccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcagggtcatgtaaat
agacaagaaaaagaagaaaaggagaacatctataaggaacgctggccagcttatataaag
gaactgcggacaagatactctgcaagcaccgtagatgttttgcaaatgatggatgatgat
aaagttgatctgaatttgattgctgcccttattcgatacattgttttggaagaagaggat
ggtgcaatattggtctttctaccaggctgggacaatatcagtactttgcatgatctcttg
atgtcacaagtgatgtttaaatcagataagtttcttattatacctttacattcactgatg
cctaccgtaaaccagacacaggtatttaaaaaaactcctcccggtgttcggaaaatagta
attgctaccaacattgcagagactagcatcaccatagatgatgtggtttatgtaatagat
ggagggaaaattaaagagacacacttcgacacacagaacaacatcagtaccatgtctgct
gagtgggttagtaaagctaatgccaagcagaggaaagggagagctggaagagttcagcct
ggtcattgttatcatctgtataatggtcttagagcaagtcttctagatgactaccaacta
ccagaaattttgagaactcctttggaagaactttgtttgcaaataaagatcttgaggctg
ggtggaattgcttattttctgagtaggttaatggatcccccatcaaatgaggcagtagtg
ctctccataaaacacctaatagaactgagtgctttggataagcaagaagagttgacacca
cttggcgtccatttagcccgactgcctgttgagccacatattggaaaaatgattctcttt
ggagctttgttctgttgcttagacccagtcctcaccattgctgccagtctcagctttaaa
gatccctttgtcattccattgggaaaagaaaagattgcagatgcaagaagaaaggaactg
gcaagggaaactagaagtgatcacctgacagtcgtgaatgcatttgagggctgggaagaa
gccaaacggcgtggtttccgatatgaaaaagactactgctgggaatattttctgtcctca
aacacattacagatgctgcataacatgaagggacagtttgctgagcatcttcttggagct
gggtttgtaagcagtagaagtcccaaagacccaaaagccaatataaattcagataatgag
aagataattaaagctgtcatctgtgccggtttatatcccaaagttgctaaaatccgacta
aatttgggtaaaaaaaggaaaatggtgaaagttcacacaaaatctgatggtctggtttct
attcatcccaagtctgtcaatgtggagcagacagacttccactacaactggcttatctat
cacctgaagatgaggacaagcagtatatacctgtacgactgtacggaagtttcaccatac
tgcctcttgttctttggaggagatatttccatccagaaagacaaggatcaggaaattatt
gctgtagatgaatggattgtgtttcagtctccagaaagaattgcccatcttgttaaggga
ctaagaaaggaactggatagcctcctacaagagaagatcgaatgccctcatcctgtggac
tggaacgacactaagtccagagactgtgcagtactgtcagctattctagacttgatcaaa
acacaagaaaaggctactccaaggaacctgcccccacgatcacaggacggatattacagc
tga
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