Apodemus sylvaticus (European woodmouse): 127683348
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Entry
127683348 CDS
T10613
Symbol
Exosc8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127683348 (Exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127683348 (Exosc8)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127683348 (Exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
127683348
NCBI-ProteinID:
XP_052036481
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All DBs
Position
4:113554211..113560480
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AA seq
311 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVRLGNTTVVC
GVKAVGLLSLSLLCGSTAALGCYCYIPGFWPLLAPQPGQEFAAPPVDAPDKGYVVPNVDL
PPLCSSRFRTGPPGEEAQVTSQFIADVIENSQIIKKEDLCISAGKLAWVLYCDLICLDYD
GNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTL
LIVDPTGEEEHLSTGTLTIVTDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSRL
LDGVMQSMEHK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggttcaaaactgtggagccgctggagtattataggagatttctgaaagaa
aactgccgtcctgatggaagagaacttggtgaattcagaactacaactgtcaacataggt
tcaatcagcacggcagacggctctgcgctggtgaggctgggcaacaccacagtcgtttgt
ggagttaaagcagtaggtctcctgtctctaagtctcctttgtggatctacagctgcattg
ggctgttattgctatatacctggcttctggccactactggctccccagcctggtcaggaa
tttgcagcaccaccagtagatgcccccgataaaggatatgtcgtccctaatgtggacctg
ccaccactgtgttcatcgaggttccggactggacctcctggggaagaggctcaagtaacc
agccagttcatcgccgatgtcattgagaactcacagataattaagaaagaagacttatgc
atttctgcaggcaagcttgcttgggttctatactgtgaccttatttgtctagactacgat
ggaaacattttggatgcctgcacctttgctttgttagcagctttaaagaatgtacagttg
cctgaagttactataaacgaagagactgctttagcagaagtcaatttaaagaagaaaagt
tacttgaatgttagaacaaaccctgttgctacttcctttgctgtgtttgatgacacttta
ttgatagttgatcctaccggagaggaggaacacctgtccacaggaaccttaacgatagta
acggatgaggagggcaagctgtgctgtcttcacaagccaggcgggagcggactgacggga
gctaaactccaggactgcatgagtcgggcagtcacgagacacaaagaagtgagcaggcta
ctggacggagtcatgcagagcatggagcacaaatga
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