KEGG   Apodemus sylvaticus (European woodmouse): 127683478
Entry
127683478         CDS       T10613                                 
Symbol
Hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asyl04121]
    127683478 (Hltf)
   03400 DNA repair and recombination proteins [BR:asyl03400]
    127683478 (Hltf)
Enzymes [BR:asyl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127683478 (Hltf)
Ubiquitin system [BR:asyl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127683478 (Hltf)
DNA repair and recombination proteins [BR:asyl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    127683478 (Hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_2 zf-RING_UBOX ResIII zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 zf-C3HC4_4 HDA2-3 zf-rbx1 zf-RING_6
Other DBs
NCBI-GeneID: 127683478
NCBI-ProteinID: XP_052036706
LinkDB
Position
4:complement(149370489..149430817)
AA seq 980 aa
MSWMFKRDPVWKYSQSVQHGAHENIPRLSYPTVFTRFEFQDTVPPDDFLTSEEELDLVLF
GTMRGQVVGIRYYTGVVNDNEMVALQREPNNPYDKNAIKVNNVNGDQVGHLKRDFAAAVA
YIMDNKLAQVEGVVPFGANNTFNMPVHITFWGKEENRKVVLDQLKKHGFKLGPTPKTLRS
SLENARGSGRAGPSYSRPVHAAVQMTTEQLKTEFDKLFEDLKEDDRTIEMEPAEAVETPL
LPHQKQALAWMISRENSKELPPFWEQRDDLYYNTITNFSVKERPENVHGGILADDMGLGK
TLTAIAVILTNFEDGRPLLSKRGKKNHPGKEYKDETIKLRGCNNKKEDRHSEPSSCSEGA
SLSDIPEKSDCTTSELSSVCPKRRKISVQYTGSNDSEEIEIAPDLPQKMKGKLKNAQLDT
KSGVKGTSMMEGSETCDTGERTRTTLIICPLSVLSNWIDQFGQHIKSEAPLNFYVYYGPD
RIRDSAWLSKQDIILTTYNILTHDYGTKDDSPLHNIKWLRVILDEGHAIRNPNAQQTKAV
LELEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFVDREWWYRIIQRPVTSGDKGGLRRL
QSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSEEERKIYQSVKNEGKAAIGRYF
TEGTVLAHYADVLGLLLRLRQICCHTHLLTSGMSSSGPSRSDTPEELRKMLVEKMKLILS
SGSDEECAICLDSLSFPVITHCAHVFCKPCICQVIQSEQPHAKCPLCRNNIHRDNLLECP
PEELACDSDSDSDKQSSVEWTSSSKINALMHALIELRTKNPNIKSLVVSQFTTFLSLIET
PLKNSGFVFTRLDGSMPQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFL
MDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKK
ADADEMKQAKINEIRTLIDL
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagggatcctgtttggaagtattcacagtctgtccagcatggt
gcccatgaaaatattccaagactttcatacccaactgtttttacacgttttgaattccaa
gacactgtccctccagatgacttcctaaccagtgaagaagagcttgatttggttttattt
ggaactatgagaggacaagttgttggtatacgctattacacaggagttgtaaatgataat
gaaatggttgctttacaacgagagcctaataatccctatgataagaatgctattaaagtc
aataatgtgaatggagatcaggttggccatttaaagagagattttgcagcagccgtggcc
tatatcatggacaacaaattggcccaagtggaaggtgtggttccttttggtgcaaataat
acttttaacatgcctgttcatataactttctggggaaaagaagaaaatagaaaagtggtt
ttagatcagttgaagaaacatggatttaaattgggtcccacaccaaaaactctaagatcg
agtttggagaatgcacggggctctggaagagctggaccaagctatagtaggccggttcat
gctgctgtacagatgactacagaacagctcaaaacggaatttgacaaattatttgaagat
ttaaaagaagatgatagaactattgaaatggaaccagctgaggctgttgaaacaccgttg
cttccacaccagaaacaagctctagcttggatgatttcccgagagaacagcaaagagctt
ccaccattctgggaacagcgcgatgacttatattataatacaataacaaatttttctgtg
aaggaacgaccagaaaatgttcacggaggaattttagctgatgatatgggtttgggtaaa
actcttactgccattgctgtaattctcaccaactttgaggatggcaggcctcttctcagt
aagagaggcaagaagaatcatccaggaaaggaatacaaggatgagaccattaaactcaga
ggatgtaataacaagaaggaagatcgacactcagagccatcctcatgcagtgaaggagcc
agtctttcagatattccggagaagagtgactgtactacgtcagaattgtctagtgtctgc
cctaaaagaagaaaaatttctgtgcagtacactggaagcaatgattcagaggaaatcgag
attgccccagatctgccccagaaaatgaaaggcaagctgaaaaatgcacagttggatact
aaaagcggagtaaaaggcacatctatgatggagggctcagagacatgtgacactggagag
agaacaagaacaacactgatcatctgtccactctctgtgctgagcaactggattgaccag
tttggacaacatataaagtcagaagcacccttgaatttttatgtttattatggtcctgat
cgtattagagactcagcctggctttcaaaacaggatattattttgactacttataatatt
ttaactcatgattatggaactaaagatgatagcccattacataacataaagtggctaaga
gtgatcctggatgaaggccatgccattcgaaatccaaatgctcagcagacaaaagctgtc
cttgagttagaggcagagagaagatgggtattgacaggtactcctatccagaattcttta
aaggacttgtggtctcttctgtcctttttaaaacttaagccatttgttgatagagaatgg
tggtataggataatacagcgtcctgtcacttcaggagacaagggaggactcaggcgttta
cagtccttaattaaaaatatcacacttagaagaacaaagacaagcaaaattaaagggaaa
cctgttttggagttaccagaaagaaaagtatttattcagcacattactctgtcagaagaa
gagagaaagatttatcaatctgttaaaaatgaaggcaaagccgccattggaaggtatttt
accgaggggactgtcctcgcacactatgcagacgtcttgggtcttctgcttaggctgcgg
cagatttgttgccacacccatcttcttacaagcggaatgtcttccagtggcccctccaga
agtgatacacctgaagaactgaggaagatgttagtagagaagatgaagttaattctgagc
tctggttcagacgaagagtgtgcaatttgcctggattcattatcgttccctgtgataaca
cactgtgcacatgtgttctgtaaaccttgtatttgtcaggtcattcagagtgagcagcca
catgcaaaatgtcctctatgcagaaataatatacacagagataatttattagaatgtcct
ccagaagagttggcatgtgacagtgacagtgacagtgacaaacagtccagtgtggaatgg
acatccagctcaaagattaatgctctaatgcatgctttgattgaattacggacaaagaac
cccaacataaaaagtttagttgtttctcagtttaccaccttcctgtctttaatagagaca
ccacttaagaactcgggatttgtgtttactcgcttagatggttccatgcctcaaaagaaa
agagttgaatcaattcagtgctttcagaacacagaggcagggtctcctactataatgctg
ctgtccttgaaagcaggtggggttggcttgaatctctgcgctgcgtctcgggtgttccta
atggacccggcctggaaccctgctgcagaagatcagtgctttgaccggtgccatcggctt
ggccagaaacaagaggttattatcacaaagttcattgtgaaggattctgttgaggaaaat
atgttgaaaatacaaaacacgaaacgagagctcgcagcgggagcctttggaactaagaaa
gcagacgctgatgagatgaaacaagctaaaatcaatgaaatcagaactctaattgattta
taa

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