Apodemus sylvaticus (European woodmouse): 127683486
Help
Entry
127683486 CDS
T10613
Symbol
Trim55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127683486 (Trim55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127683486 (Trim55)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127683486 (Trim55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
COS
DUF1664
Motif
Other DBs
NCBI-GeneID:
127683486
NCBI-ProteinID:
XP_052036719
LinkDB
All DBs
Position
4:complement(149905659..149948727)
Genome browser
AA seq
545 aa
AA seq
DB search
MSTSLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKLD
QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAVLV
GSNDRIQGVISQLEDTCKTIEECCRKQKQDLCEKFDHLYGILEERKTEMTQAITRTQEEK
LEHVRTLIRKYSEHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLQKIVEASTAFQMEKI
EQGYEIMSNFTVNLNREEKIIREIDFSREDEEEEDAGEIDEEGEGEDSVDVEEAEIVQIA
SSGEEETLEKAAEPCQQAAEVQAAPGPPLASSPEPLSSMPPAADVLVTQGEVVPIGSQQT
TQSETSGPSAPETADPLFYPSWYKGQSRKTSSSPPCTPGSEGLGQIGPRGAEDSSVQSAQ
VAEAAANEQAAVSGKESSSTAATSQIGFEAPSPQGQAAALGSGGGAGSEPARHVFSFSWL
NSLNE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttctctgaattacaagtctttctccaaagagcagcagaccatggataacctg
gaaaagcagctgatctgccccatctgcctagagatgttcaccaagcccgtggttatcctc
ccctgccagcacaacctgtgcaggaaatgtgccagcgacatcttccaggcctccaacccg
tacttacccacaagaggaggcaccactgtggcctcggggggccgcttccgctgtccatcc
tgcaggcatgaggtggtgttagacagacatggggtctatggactgcagaggaacctgctc
gtggaaaacatcattgatatctacaagcaggagtccaccaggccagaaaaaaaattggac
cagcccatgtgtgaggagcatgaagaggaacgcatcaacatctattgtctgaactgtgaa
gtgcccacctgctccttgtgcaaggtttttggcgctcataaggactgccaggtggctccc
ctgactcatgtcttccagaggcagaagtcagagctcagtgacggtattgctgtacttgtg
ggaagcaacgacagaatccagggcgtgatcagccaactggaggacacctgcaaaactatt
gaggagtgctgcagaaagcagaaacaggacctgtgtgagaagttcgatcacctatacggc
atcctggaggagaggaagaccgaaatgactcaagccatcacccgaacacaagaggagaaa
ctggagcacgtccggactcttatcagaaagtattctgagcacctggagaacgtatcgaag
ttggtggagtcaggaatccagttcatggatgagcccgaaatggcggtgtttctgcagaat
gccaagaccctgttgcaaaagattgtggaagcatcgacggcatttcagatggagaaaata
gaacaaggctatgagatcatgagcaacttcacagtcaatctcaatagagaagaaaaaatt
atccgcgaaattgacttttctagagaagatgaagaggaagaagatgcaggggaaatagat
gaagaaggagaaggagaggattcagtagatgtagaagaggcagaaattgttcaaatagca
tcttcgggggaagaggagactctggaaaaagctgcggagccctgtcagcaggctgcagag
gtccaggctgccccagggccaccacttgcttcctctccagaaccactttcatccatgcca
cctgctgcagatgtcctggtgacacagggggaggtggtgcccattggctctcagcagacc
acacagtctgaaacttcaggcccttcagcaccggaaactgcggatcccttgttttaccct
agttggtataaaggccaaagccggaaaaccagctccagcccaccttgcactcctgggagt
gaaggtctgggtcaaatagggcctcggggtgctgaggattccagcgtgcagtccgcccaa
gtagcagaagccgcagccaatgagcaggcagcagtgagtggtaaggaatctagctcaact
gcagctacctctcagattggatttgaggccccttctccccagggacaggctgcagccttg
gggagtggaggtggggctggctctgagccagctcgccacgtcttctccttctcctggttg
aattccctgaatgaatga
DBGET
integrated database retrieval system
