Apodemus sylvaticus (European woodmouse): 127683694
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Entry
127683694 CDS
T10613
Symbol
Trpc4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04360
Axon guidance
asyl04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
127683694 (Trpc4)
09158 Development and regeneration
04360 Axon guidance
127683694 (Trpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asyl04040
]
127683694 (Trpc4)
Ion channels [BR:
asyl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127683694 (Trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
127683694
NCBI-ProteinID:
XP_052036928
LinkDB
All DBs
Position
4:complement(114007261..114144420)
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AA seq
974 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLVKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIREAKTEEGLTEENVKELKQDISSFRFEVLGLLRGSKLSTIQSANAASSADSDEKSQSE
GNDKDKRKNLSLFDLTTLIHPRSAVIASERHNLSNGSALVVQEPPREKQRKVNFVADIKN
FGLFHRRSKQNAAEQNANQIFSVSEEITRQQAAGALERNIQLESQGLASRGDRSIPGLNE
QCVLVDHRERNTDTLGLQVGKRMCSSFKSEKVVVEDTVPIIPKQKHAQEEDSSIDYDLSP
TDTAAHEDYVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgtcaacgccccctacagagaccgcatcccactg
aggattgtcagagcagagtctgagctctcaccatcggagaaagcctacttgaatgctgtg
gagaagggggactatgccagcgtcaagaaatctctggaggaagctgagatttactttaaa
atcaacattaactgcattgacccccttggaaggactgctcttctcattgccattgaaaac
gagaacctggagcttattgagctattgttgagtttcaatgtctacgttggcgatgcgctg
cttcacgccatcagaaaagaggtggttggagctgtggagctgttgctgaaccacaaaaag
ccaagtggagagaagcaggtgcctcccattctccttgataagcagttctctgagttcacg
ccagacatcacacccatcatcttggctgcacatacaaataattatgagataatcaaactt
ttggtccagaaaggtgtctcagtgcccagaccccacgaagtccgctgcaactgtgtcgag
tgtgtctccagctcggacgtggacagcctcaggcactcacggtccaggctcaacatctac
aaggcgttggccagcccctcgctcattgccctgtccagcgaagaccctttccttaccgcc
tttcagttaagctgggagctgcaagaactgagcaaggtggagaatgaattcaagtcggag
tatgaggagctgtctagacagtgcaaacaatttgctaaggacctcctagatcagacacgg
agttccagggagctggaaatcattcttaattaccgtgatgacaatagcctgatcgaagaa
cagagtggaaatgatcttgcgaggctaaaattagccattaagtaccgtcagaaagagttt
gttgctcagcccaactgccagcagctgctcgcatcccgctggtatgatgagttcccaggc
tggaggagaagacactgggcggtgaagatggtgacgtgtttcataataggactactcttt
cctgtcttctccgtgtgctacctgatagctcccaaaagcccacttggactgttcatcaga
aagccatttatcaagtttatctgccacacagcctcctatctgacctttttgtttctgctg
ctcctagcctcccagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtggagtggatgatattaccgtgggtcctgggttttatatggggagagattaaacag
atgtgggatggcggactccaggattacatccacgactggtggaatctaatggactttgtg
atgaactccttgtatctggccacaatctccttgaagattgtcgcgtttgtcaagtacagt
gctctgaacccacgggaatcatgggacatgtggcaccccaccctggtggcagaggcatta
tttgctattgcaaacatcttcagttccctccgcctgatctctctgttcactgccaattct
cacctggggcctctgcagatctctctgggaagaatgcttctggacatcctgaagttctta
ttcatctactgcctcgtgctgctagctttcgccaatggcctaaatcagctgtacttctac
tatgaagaaacaaaggggttaagctgcaaaggcatacggtgcgagaagcagaacaacgcc
ttttccacgttatttgagacactacaatccctattttggtcaatatttggactcatcaat
ctctatgttaccaatgtcaaagcccagcatgagttcactgagtttgttggggccaccatg
tttggcacatataatgtcatctctctggttgtcctgctgaacatgttaatcgctatgatg
aataattcttaccaactaattgctgaccatgcagatatagaatggaaatttgctcgaaca
aagctttggatgagctactttgaagaaggaggtaccctgcctacacctttcaatgtcatc
ccaagccccaagtccctgtggtacctggtcaagtggatatggacacacttatgtaagaaa
aagatgagaagaaagccagaaagcttcgggacaattgggcggcgtgctgctgataacttg
agaagacatcaccaataccaagaggtgatgaggaatctggtgaagcggtacgtggcagcc
atgatcagggaggcaaaaaccgaagaaggcttgacggaggagaacgttaaggaactaaag
caagacatttctagcttccgcttcgaagttctgggattgctcagaggaagcaagctctct
acgatacagtcagccaacgcggcgagttcagcggactccgatgagaagagccagagcgaa
ggtaatgacaaggacaagagaaagaatctcagcctctttgatttaaccactctgatccac
ccgcggtcggcagtcattgcctctgagagacataacctaagcaatggttccgccctggtg
gtgcaggagccgcccagggagaagcagaggaaagtgaattttgtggctgatatcaaaaac
ttcgggttatttcatagacggtcaaaacaaaatgctgctgagcaaaacgcaaaccaaatc
ttctctgtttcagaagaaattactcgtcaacaggcggcaggagcacttgagagaaatatc
cagctggaatcccaaggattagcttcacggggtgaccgcagcattcctggtctcaatgaa
cagtgtgtgctagtagaccatagagagaggaatacggacactttgggtttacaggtaggc
aagagaatgtgctcctccttcaagtcggagaaggtcgtggtggaagacaccgtccctatt
ataccaaagcagaaacacgcccaggaggaagactcaagcatagactatgatttaagcccc
acggacacagctgcccacgaagattacgtgaccacaagattgtga
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