Apodemus sylvaticus (European woodmouse): 127684718
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Entry
127684718 CDS
T10613
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127684718 (Ctcfl)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127684718 (Ctcfl)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127684718 (Ctcfl)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127684718 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_15
Zf-C2H2_ZNF451
zf-Di19
zf-C2HE
zf-C2H2_REST
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF462_1st
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
127684718
NCBI-ProteinID:
XP_052037549
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All DBs
Position
5:complement(158741188..158760946)
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AA seq
636 aa
AA seq
DB search
MATTEAPVPSGHFTQIKEQKLKTGDLEEEKEEGGVQRVEAQEEAVTEAEAEDSCLQLDTL
PQELPSRVESDRRILTLQAVHLASQDLHLQGLAWLSVTHSEELPETVPQAEGILQLPSVL
WFDPEPHLSLQHCVTVSIPEELYPPEELELMHFHLLRENVPEAEEDQELTPDLDESTALK
KPEEDEKDQLPPQGGTDKKEERFLFVEMEPKEGKDDIVLTISRLSLEEEPQDPPEAKQTN
VPQRAKASKPKPRRQSKGEPRTFKCDSCPFASSKLSTFNRHIKIHSDERPHLCHLCLKAF
RTVTLLRNHLNTHTGTRPYKCEDCDMAFVTSGELVRHRRYKHTHEKPFKCSLCKYASVEA
SKLKRHIRSHTGERPFQCHQCDYASRDTYKLKRHMRTHSGEKPYECPTCHSRFTQSGTMK
IHMSQKHGENVPKHECPHCATIIARKSDLRVHLRNLHSHSPEEVKCRYCPAGFHERYALL
QHQRTHKNEKKFKCKQCDYACKQERCLTAHMRTHTGEKPFSCPTCNKHFRQKQLLTVHLR
KYHDPSFVSSVHLCLKCDKGFSRWSNLQRHRKKCDPEPVMRTQASEGGAGRDDDIVIQES
ATSGEQAPGHQGESAMGNQSPDQGLTCEMIFNMMDK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctaccactgaggcccctgtcccttctgggcacttcacccagatcaaagagcagaag
ttgaagactggagacctagaggaggaaaaggaggagggtggggtccaacgagtggaagcc
caggaggaggctgtgacggaggcagaggcggaggacagctgcctgcagctggatacctta
ccccaggagctgccttcaagggtggagagtgacaggcggatcctgaccctgcaagccgtg
cacctggcgtcccaggatctgcacctccaggggctggcatggctgagcgtgacgcactcc
gaggagcttccagagaccgtgccacaggcggaaggcatactgcagttgccatccgtgctg
tggttcgacccagagccccatctcagccttcagcactgcgtgacggtcagcatccctgaa
gagctgtacccaccagaggagctggagctgatgcatttccacctgctgagagagaacgtg
cccgaggctgaggaggaccaggagttaacgccagacttggacgaaagcacagccctgaag
aagcccgaagaagatgaaaaggaccagctcccgccccagggagggacagacaagaaagaa
gagagattcctctttgtggaaatggaaccaaaagaagggaaagacgacatcgttctgacc
atttcccggctaagcctagaagaagaaccgcaagatccgcccgaggcaaagcagacgaat
gtgccgcagagagccaaagcctcgaaaccaaaaccacgaaggcagagcaagggagaacct
cgcaccttcaagtgcgacagctgcccgttcgcttcttccaaactctcaactttcaatcgt
cacatcaagatccacagcgacgagaggccacacctgtgccacctgtgcctgaaggccttc
cggaccgtcactctcctcagaaaccacctcaacacccacacaggaaccagaccctacaag
tgcgaggactgtgacatggcgtttgtcaccagtggagaactcgtccggcacaggcgttac
aaacacactcatgagaagcccttcaagtgctccctgtgcaagtatgccagcgtcgaggca
agcaagctgaagcgacacatccgctcacacacgggcgaacgccccttccagtgtcaccag
tgtgattacgccagcagggacacctacaagctgaagcgccacatgcggacacactcaggt
gagaagccgtatgaatgtcccacctgtcactcccggttcacccagagtgggaccatgaaa
atccatatgtcgcagaagcatggcgagaatgtgcccaaacatgagtgtccccactgtgcc
accatcattgcgaggaagagcgacctgcgtgtccatctgcgcaacctgcacagccacagc
cccgaggaggtcaagtgcaggtactgccccgccggcttccacgagcgctatgccctcctc
cagcaccagaggacgcacaagaacgagaagaagttcaagtgcaaacagtgcgattacgcg
tgcaagcaggagcgatgcctgacggcgcacatgcgcacgcacacgggagagaagcccttc
tcctgcccgacctgcaacaaacacttccgacagaagcagctgcttaccgtgcacctgagg
aagtaccacgaccccagctttgtctccagcgtgcacctctgcctcaagtgtgacaaaggt
ttctcccgctggagtaaccttcagagacacagaaagaagtgtgacccagagccagtgatg
aggacacaggcctcggagggaggagcaggacgtgacgacgatattgtcatccaggagagt
gccacctcaggggagcaggctcccggccaccaaggagaaagtgcaatggggaaccagagc
ccggaccaaggcctgacctgcgagatgatctttaacatgatggataagtga
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integrated database retrieval system
