KEGG   Apodemus sylvaticus (European woodmouse): 127685028
Entry
127685028         CDS       T10613                                 
Symbol
Cacna1b
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04010  MAPK signaling pathway
asyl04020  Calcium signaling pathway
asyl04721  Synaptic vesicle cycle
asyl04723  Retrograde endocannabinoid signaling
asyl04725  Cholinergic synapse
asyl04726  Serotonergic synapse
asyl04727  GABAergic synapse
asyl04728  Dopaminergic synapse
asyl04930  Type II diabetes mellitus
asyl05016  Huntington disease
asyl05020  Prion disease
asyl05022  Pathways of neurodegeneration - multiple diseases
asyl05032  Morphine addiction
asyl05033  Nicotine addiction
asyl05207  Chemical carcinogenesis - receptor activation
Brite
Ion channels [BR:asyl04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   127685028 (Cacna1b)
SSDB
Other DBs
NCBI-GeneID: 127685028
NCBI-ProteinID: XP_052037730
LinkDB
Position
5:complement(3551405..3717780)
AA seq 2331 aa
MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAA
TKKSRNDLIHAEEGEDRFVDLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVK
AQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRS
YFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEMEEAANQKLALQKAKEVAEVSPMSAANMSIAARQQNSAKARSVWEQRASQLRLQNL
RASCEALYSEMDPEERLRYASTRHVRPDMKTHMDRPLVVEPGRDGLRGPVGNKSKPEGTE
ATESADLPRRHHRHRDRDKPSATAPAGGEQDRTDCPKTESTEPGAREERARPRRSHSKET
PGADTQAGPARCERSRRHHRRGSPEEATEREPRRHRAHRHAQDSSKEGTAPVLVPKGERR
ARHRGPRTGPREAENSEEPTRRHRARHKVPPTLEPPEREAAEKENNVLEGDKETRNHQPK
ETHCDLEAVAVAGVGPLHMLPSTCLQKVDEQPEDADNQRNVTRMGSQPTDPSTTVHVPVT
LAGPPGETTVAPSGNTDPEGQAEGKKEAAADDVLRRGPRPIVPYSSMFCLSPTNLLRRFC
HYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFEMVIKMI
DLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIKSLRVLRVLRPLKTIK
RLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCR
GQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQG
PSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFA
ISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELML
KCLNIVFTSMFSMECILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIANNFINLS
FLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIA
LDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPHANASECGSDFAY
FYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIS
YNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEI
KLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYK
QNKTTRDQTHQAPGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSATSLSNGGA
IQTQESGIKESLSWGTQRTQDALSEARAPLERGHSAEIPVGQPGTLAVDVQMQNMTLRGL
DGGPQPGLESQGRAASMPRLAAETQPAPNASPMKRSISTLAPRPHGTQLCSTVLDRPPPS
QAPHHHHHRCHRRRDRKHRSLEKGPSLSVDTEGAPSTAARSGPAHGEGPTGCRRERKQER
GRSQERRQPSSSSSEKQRFYSCDRFGSRDPPQPKPSLSSHPTSPTAALEPGPHLQGSGSV
NGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLPAFSPGRL
SRGLSEHNALLQKEPPSQPLAPGSRIGSDPYLGQRLDSEASAHTLPEDTLTFEEAVATNS
GRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLGTGVRARHSYHHPDQDHWC
NT seq 6996 nt   +upstreamnt  +downstreamnt
atggtccgcttcggggacgagctgggcggccgctatgggggcaccggcggcggggagcgg
gctcggggcggcggggccggcggggcgggtggcccgggccaggggggtctgccgccgggc
cagcgggtcctgtacaagcagtccattgcgcagcgcgcacggaccatggccctgtacaac
cccatcccagtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgctaagcgcatcaccgaatggccgcccttcgaatacatg
atcctggccaccatcatagccaactgcattgttctggccctggagcagcacctccctgat
ggggacaagactcccatgtctgagcgactggatgacacggagccttacttcatcgggatc
ttttgcttcgaggcgggtatcaagatcatagccctgggcttcgtgttccacaagggctcc
taccttcggaacggctggaacgtcatggacttcgtggtggtcctcacagggattctcgcc
acagctggaaccgactttgacctgcgcaccctgagggctgtgcgcgtgctcagacccctg
aagctggtgtctggaattccaagcttgcaggtggtgctcaagtccatcatgaaggccatg
gtcccgctgctgcagattgggctgttactcttctttgctatcctcatgttcgccatcatc
ggcctcgagttctatatgggcaaattccataaggcctgtttccccaacagcacagatgca
gagcctgtgggtgactttccctgtggcaaggaggctcctgctcgtctgtgtgagggtgac
acggaatgccgggagtactggccgggacccaactttggcatcactaattttgacaacatc
ctttttgccatcttgacggtgttccagtgtatcaccatggagggctggactgacatcctc
tacaatacaaatgatgcggctggcaacacgtggaactggctatacttcatccctctcatc
atcattggctccttcttcatgctcaacctggtgctgggtgtgctttcgggagagtttgcc
aaggagcgggagcgagttgagaaccgccgcgccttcctgaagctccgcaggcagcagcag
attgagcgagaactgaatgggtacttggagtggatcttcaaggcagaggaagtcatgttg
gcagaggaggacaagaatgcagaagagaagtcccctttggatgtgttgaagagagctgcc
accaagaagagccgaaacgacctcatccacgcggaagagggggaggatcggtttgtagac
ctctgtgctgttgggtctccctttgctcgtgccagcctcaagagcgggaagacggagagc
tcatcgtacttccggaggaaggagaagatgttccggttctttatccggcgtatggtgaag
gcacagagcttctactgggtggtactgtgcgtagtggccctgaacacgttgtgtgtggcc
atggtgcactataatcagcctcagcggcttaccactgcactgtactttgcagagtttgtt
tttctgggtctcttcctcacagagatgtccctgaagatgtatggcctggggcccagaagt
tacttcaggtcttccttcaactgctttgactttggggtgattgtggggagtatctttgaa
gtagtctgggctgccatcaagccaggaacctcctttggaatcagtgtgctgcgggctctc
cgactgctgaggatattcaaagtcaccaagtattggaactccctgaggaacctggtggtt
tccctcctaaactccatgaagtccatcatcagcctcctcttcctgcttttcctcttcatc
gtggtcttcgctctgttggggatgcagctgtttgggggacagttcaactttcaagatgag
actccaaccaccaactttgataccttcccagctgccatcctcactgtctttcagatcctg
acaggagaggactggaatgcagtgatgtatcatgggattgagtcacaaggtggagtcagc
aaaggcatgttttcttccttttacttcatcgtcctgacactgtttggaaactacaccctg
ctgaacgttttcctggccattgctgtggacaaccttgccaatgcccaggagttgaccaag
gatgaagaggagatggaagaagcagccaatcagaagcttgctcttcagaaggccaaagaa
gtagctgaagtcagccccatgtctgctgctaacatgtccattgctgccaggcagcagaat
tctgccaaggcgcgctcagtatgggagcagcgggccagtcagctaaggctccagaacctg
cgtgccagctgtgaggctctgtacagcgagatggaccccgaggagcgcctgcgttatgcc
agcacgcgccacgtgaggccggacatgaagacacacatggaccgacccctagtggtggag
cctggtcgggatggtttgcggggacccgttgggaacaagtcaaagcctgagggcacagag
gccactgaaagcgcagacctaccgcgccggcaccaccggcatcgtgatagggacaagccc
tcagccacagcccctgctggaggcgaacaggacaggacagactgccccaagaccgaaagc
actgagccgggagcccgggaggaacgtgcgcgccctcgtcgaagtcacagcaaggagact
ccaggggcagacacgcaagcagggccagcgcgctgtgagcgcagtaggcgtcaccaccgg
cgcggctccccggaggaggccactgaacgggagcctcggcgccaccgtgcccaccggcat
gcacaggactcaagcaaggagggcactgccccagtgcttgtacccaagggcgagcgacgc
gcaagacaccgaggcccacgcacaggcccacgtgaggcagagaacagcgaggagcccaca
cgcaggcaccgtgcaaggcataaggtgccaccaacacttgagccccctgagagggaggct
gcagagaaggagaacaacgtgttggagggggataaggaaacccgaaatcaccagcccaag
gaaactcactgtgacctggaggccgttgcagttgcgggtgtgggccctctgcacatgctg
cccagcacctgtctccagaaggtggacgagcagccagaggatgcagacaaccagcgcaat
gtcacccggatgggcagccagcccacagaccccagcaccacggtgcatgtcccagtgaca
ctggcaggccctcccggggagaccactgtcgctcccagtggtaacacggacccggaaggc
caagcagagggcaagaaggaggcagcggctgatgatgtgctgagaagaggccccaggccc
atcgttccctacagctccatgttctgtctcagtcccaccaacctgcttcggcgattctgc
cattacattgtgaccatgcggtactttgagatggtaattctcgtggtcattgccttgagc
agcattgccttggctgcagaggatcctgtgcggaccgattcatttcggaacaacgcttta
aagtacatggattacatctttacaggagtcttcacctttgaaatggtcataaagatgata
gacttgggcctgttgctgcaccctggggcctacttccgggacctgtggaacattctggac
ttcattgttgtcagtggagctctggtggcatttgcgttctcaggatccaaagggaaagac
atcagcaccatcaagtctctgagagtcctgcgagtcctgcggcccctgaagaccatcaag
cggctgcccaagctcaaggctgtgtttgactgtgtggtgaactccctgaagaatgtcttg
aacatcctgatcgtctacatgctcttcatgttcatatttgccgtcatcgcggtccagctc
ttcaaagggaagttcttttactgtactgatgaatccaaggagctggagagggactgccgg
ggtcagtatttggattatgagaaggaagaagtggaggcccagccaagacagtggaagaaa
tacgacttccactacgacaatgtgctctgggccttgctgacgctgttcacggtgtccaca
ggagaggggtggcccatggtgctgaaacactctgtggacgccacctatgaggagcagggg
ccgagccccgggtttcggatggagctctccatcttctatgtggtctactttgtggtcttc
ccgtttttctttgtcaacatctttgtggccttgatcattatcaccttccaggaacagggg
gacaaggtgatgtctgaatgcagcctggaaaagaatgagagggcttgcattgactttgcc
atcagcgccaagcccctgacacggtacatgcctcaaaacaaacaatcattccagtataag
acgtggacattcgtggtctctccaccctttgagtacttcatcatggctatgatagccctc
aacacagtggtgctgatgatgaagttctatgatgcgccttatgagtatgagctgatgctg
aaatgcctgaacatcgtcttcacgtccatgttctctatggagtgcatcctgaagatcatc
gcctttggggtattgaactacttcagagatgcctggaacgtctttgactttgtcactgtt
ttgggaagtattactgatattttagtaacagagattgcgaacaacttcatcaacttgagc
ttccttcgcctcttccgggcagcacggctgatcaagctgcttcgccagggctacaccatc
cgcatcctcctgtggactttcgtccagtccttcaaggcgctgccctacgtgtgccttctc
atcgccatgctgttcttcatctacgccatcatcggcatgcaggtttttggaaacattgcc
cttgatgatgacaccagtatcaaccgacacaacaacttccggacatttctgcaagcctta
atgctgttgttcaggagtgccactggggaggcctggcatgagatcatgctgtcttgtctg
ggcaaccgggcctgcgacccacatgccaacgccagcgagtgtgggagtgactttgcctat
ttctattttgtctccttcatcttcctctgttcctttctgatgttgaacctctttgttgct
gtaatcatggacaattttgagtacctcacacgggactcttccatcctagggcctcatcac
ctagacgaattcattcgagtctgggctgagtacgacccagctgcgtgtgggcgcatcagt
tacaatgacatgtttgagatgctgaaacacatgtccccacctctggggttggggaagaaa
tgcccggctcgagttgcatacaagcgcctggttcgcatgaacatgcccatatccaatgag
gacatgacggtacactttacatccacactgatggccctcatccggacggcactggagatc
aagctcgccccagcggggacaaagcagcaccagtgcgatgctgagctgagaaaggagatc
tcttctgtgtgggctaatctgccccagaagactctggacctgctggtaccaccccacaaa
cctgacgagatgacagtggggaaggtctatgcggctctcatgatatttgacttctacaag
cagaacaaaaccaccagagatcagactcaccaagctcctggaggcctgtcccagatgggt
cctgtttccctgttccaccctctgaaggccaccctggagcagacacagcccgccgtgctc
cgaggagctcgggtattccttcggcaaaagagtgcaacttccctcagcaatgggggtgcc
atacaaacccaggaaagtggcatcaaggagtcactgtcctggggcacgcagaggacccag
gatgcactttctgaggccagagcacctctagaacgtggccattctgcagagatccctgtg
gggcagccaggaacactggctgtggatgtccagatgcagaacatgacattgagaggactg
gatggggggccccagcctgggctagagagccaaggccgagctgcctctatgccacgcctg
gcggcagaaacacagccggctcctaatgccagccccatgaagcgctccatctccacactg
gctccacgcccgcatgggactcagctttgcagcacagtcctggaccggcctcctcctagc
caggcgccacatcaccaccaccaccgctgccaccggcgcagggacaggaaacacaggtcc
ctggagaaggggcccagcctgtctgttgacacagaaggcgcaccaagcactgctgcaaga
tctggcccagcccatggagagggacccacgggctgccggcgggagcggaagcaggagcga
ggccggtcccaggagaggaggcagccctcatcctcttcttcagagaagcagcgcttctat
tcttgtgaccgctttgggagccgggatcccccacaacctaagccctccctcagtagccac
ccgacatcgccaacagcagcactagagccaggaccccacctacagggcagtggctccgtt
aatgggagccccttgatgtcaacatctggtgctagcaccccgggccgaggcgggcggagg
cagctcccccagactcctctgaccccgcgccccagcattacctacaagaccgccaactcc
tcgcctgtccactttgcggagggtcagagtggcctcccagccttctcccctggccgcctc
agccgcggcctttctgaacacaatgccctgctccagaaggagcccccgagccagcctcta
gctcctggctcccgaattggctctgacccttacctagggcagcgtctggacagtgaggcc
tccgcccacaccctgcctgaggatacactcacctttgaagaggcagtggctaccaactct
ggccgctcctccaggacttcctatgtgtcctccctcacttcccaatcccaccctctccgc
cgtgtacccaatggctaccactgcactctgggactcggcactggcgtccgggcacggcac
agttatcaccacccagaccaggaccactggtgctag

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