KEGG   Apodemus sylvaticus (European woodmouse): 127685123
Entry
127685123         CDS       T10613                                 
Symbol
Rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl03320  PPAR signaling pathway
asyl04148  Efferocytosis
asyl04151  PI3K-Akt signaling pathway
asyl04659  Th17 cell differentiation
asyl04919  Thyroid hormone signaling pathway
asyl04920  Adipocytokine signaling pathway
asyl04928  Parathyroid hormone synthesis, secretion and action
asyl04932  Non-alcoholic fatty liver disease
asyl04976  Bile secretion
asyl05160  Hepatitis C
asyl05200  Pathways in cancer
asyl05202  Transcriptional misregulation in cancer
asyl05207  Chemical carcinogenesis - receptor activation
asyl05216  Thyroid cancer
asyl05222  Small cell lung cancer
asyl05223  Non-small cell lung cancer
asyl05226  Gastric cancer
asyl05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    127685123 (Rxra)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    127685123 (Rxra)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    127685123 (Rxra)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    127685123 (Rxra)
   03320 PPAR signaling pathway
    127685123 (Rxra)
   04919 Thyroid hormone signaling pathway
    127685123 (Rxra)
   04928 Parathyroid hormone synthesis, secretion and action
    127685123 (Rxra)
  09154 Digestive system
   04976 Bile secretion
    127685123 (Rxra)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127685123 (Rxra)
   05202 Transcriptional misregulation in cancer
    127685123 (Rxra)
   05207 Chemical carcinogenesis - receptor activation
    127685123 (Rxra)
  09162 Cancer: specific types
   05226 Gastric cancer
    127685123 (Rxra)
   05216 Thyroid cancer
    127685123 (Rxra)
   05222 Small cell lung cancer
    127685123 (Rxra)
   05223 Non-small cell lung cancer
    127685123 (Rxra)
  09172 Infectious disease: viral
   05160 Hepatitis C
    127685123 (Rxra)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    127685123 (Rxra)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    127685123 (Rxra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:asyl03000]
    127685123 (Rxra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:asyl03310]
    127685123 (Rxra)
Transcription factors [BR:asyl03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    127685123 (Rxra)
Nuclear receptors [BR:asyl03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   127685123 (Rxra)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 127685123
NCBI-ProteinID: XP_052037913
LinkDB
Position
5:6746428..6831109
AA seq 467 aa
MDTKHFLPLDFSTQVNSSSLNSPTGRGSMAAPSLHPSLGPGIGSPLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQAT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacaccaaacatttcctgccgctcgacttctctacccaggtgaactcttcgtccctc
aactctccaacgggtcgaggctccatggctgccccctcgctgcacccctccctgggtcct
ggaatcggctctccactgggctcccctgggcagctacactcacctatcagcaccctgagc
tcccccatcaatggcatgggtccacccttctctgtcatcagctcccccatgggcccgcac
tccatgtcagtacccaccacacccacattgggctttgggactggtagcccccagctcaat
tcacccatgaaccccgtgagcagcagtgaggatatcaagcccccactaggcctcaatggc
gtcctcaaggttcctgcccatccctcaggaaatatggcctccttcaccaagcacatctgt
gctatctgtggggaccgctcctcaggcaaacactacggggtatacagttgtgagggatgc
aagggcttcttcaagaggacagtacgcaaagacctgacctacacctgccgagacaacaag
gactgcctgatcgacaagagacagcggaaccggtgtcagtactgccgctaccagaagtgc
ctggccatgggcatgaagcgggaagccgtgcaggaggagcggcaacgaggcaaagaccgg
aatgagaacgaggtggagtccaccagcagtgccaacgaggacatgcctgtagagaagatt
ctggaagctgagctcgctgttgagcccaagactgagacatacgtggaggcaaacatgggg
ctgaaccccagctcaccaaatgaccctgttaccaacatctgtcaagcagcagacaagcag
ctcttcactctggtggagtgggccaagaggatcccgcacttctctgagctgcccctggac
gaccaggtcatactgctccgggcaggctggaatgagctgctgatcgcctccttctcgcac
cgctccatagccgtgagagacgggatcctgcttgccaccggcctgcacgtacaccggaac
agcgcgcacagtgccggggtgggcgccatctttgacagggtgctaacggagctggtgtct
aagatgcgcgacatgcagatggacaagacggagctgggctgcctacgagccattgtcctg
ttcaaccctgactctaaggggctctcaaaccctgctgaggtggaggcgctgagggagaag
gtgtatgcatcactagaagcatactgcaaacacaagtaccccgagcagccgggcaggttt
gccaagctgctgctccgcctgcctgcactgcgttccatcgggctcaagtgcctggagcac
ctgttcttcttcaagctcatcggggacacgcccatcgacaccttcctcatggagatgctg
gaggccccacatcaagccacctag

DBGET integrated database retrieval system