Apodemus sylvaticus (European woodmouse): 127685141
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Entry
127685141 CDS
T10613
Symbol
Ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asyl01009
]
127685141 (Ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asyl03009
]
127685141 (Ddx31)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127685141 (Ddx31)
Protein phosphatases and associated proteins [BR:
asyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127685141 (Ddx31)
Ribosome biogenesis [BR:
asyl03009
]
Eukaryotic type
Pre-60S particles
Helicases
127685141 (Ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Pribosyltran
Motif
Other DBs
NCBI-GeneID:
127685141
NCBI-ProteinID:
XP_052037951
LinkDB
All DBs
Position
5:7914546..7981462
Genome browser
AA seq
687 aa
AA seq
DB search
MTRQAEATKRKHQVSSDAPPAKRRSEISSLSAKKASDKETQRTFKGSAHKTFPPKKYLDS
IVNGRQEEKPCIKTSSLFKNNPEIPELHRTVVKQAREPVFSPEAFQELDLHPHLISTINT
VLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPY
ALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRL
VDHIKFTKNLHFNRIQWLIMDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTE
GVTRLADISLHNPVSISVLDKSWDQPNPKEVASTQPDSFAIPESLNQHVVLVPSKLRLVC
LAAFILQKCKFEKDQKMIIFFSSCELVEFHYGLFLHTLLCHSGSPTSEQLPSACWPLKFL
RLHGNMEQEERTSVFYEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSSPAEYIHRI
GRTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILAVLAKDDCFKRRQRGAQ
KSHAIGPQEIRERATMLQTVFEDYVHSSEKMVSWAKKALQSFIRAYATYPKELKSIFHVR
SLHLGHVAKSFGLRDAPRNLSVCTVKKARLKRPDPRRRIQRRHHLMPAEVLHSEHASGLE
GDGTKGRKQGKPQGLQGAPSKPGLWRE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggcaagcagaggctaccaagagaaagcaccaagtgtccagtgatgctccacca
gcaaaacggaggagtgaaatatcctctctttcagccaagaaagccagcgataaagaaact
cagagaacatttaaagggagcgcacacaaaacgtttcctccaaagaagtatttggacagt
atagtcaatggaaggcaagaggagaagccatgcatcaagacatcgtcgctgtttaaaaac
aatcctgagatcccagaactccacagaactgtagtgaagcaggctcgagagccagtgttc
tctccagaagctttccaagagctggacctccacccacatctaatttccacaataaataca
gtcttaaaaatgtccagtatgaccagtgttcagaagcagagtatcccagtgctgctggaa
ggcagagatgccctggtgcggtcccaaacgggctcaggtaaaactcttgcctattgcatc
cctgtggtccagtctcttcaagcactgacatcaaaaatacagcgcagtgatgggccctat
gctttggtcctagtgcccaccagagagttggctctgcaaagctttgacactgttcagaag
ctacttaagccattcacctggattgttcctggagtgttgatgggcggagagaagaggaaa
tcagaaaaagctagactccgcaaaggcataaatatccttatctcaactcctggccgtcta
gtggatcacataaaattcacaaagaaccttcactttaacagaatacagtggctgattatg
gatgaagcagacaggatcttggatttgggttttgagaaggacatcacagtgattctgaat
gctgtaaatgctgagtgtcagaaacggcagaatgtcctcctgtcagcgacactgacagaa
ggtgtaacacggctagctgatatcagtttgcacaatccagtcagtatctctgtcctggac
aaaagctgggatcagcccaatcctaaggaagttgctagtacccagccagacagctttgca
atcccagagagtctcaaccagcatgtggtattggttcccagcaagctgcgccttgtctgc
cttgcagccttcatcctgcaaaagtgcaagtttgagaaggaccagaagatgattatcttt
ttctcaagttgtgagctggtggagttccactatggcctctttcttcacaccctgctttgc
cactcagggagccctacttcagagcagctgccatctgcctgctggccactgaaattcctt
cggctacatggcaacatggagcaggaggaaagaacgtccgtattttatgagttctcccat
tctggaactggagttttactctgcacggatgttgcatctcgaggcttagatctgccacaa
gtcacctggattgttcagtacagtgctccgtcttcacctgcagagtacattcaccgcatc
ggaagaactgcccggattggctgtcatgggagcagcctgctcattttggctccttcagag
gcagaatatgtcaactcgttggcttctcacaaaatcaatgtttctgagattaagatggaa
gatattttggctgttctggcaaaggatgattgttttaaaaggagacaaaggggagcccag
aaatcccatgccattggcccccaggaaatccgagaacgagccacaatgttgcagacagtg
tttgaagattatgtgcactccagtgagaagatggtctcctgggcgaagaaagccctgcag
tccttcatccgagcctatgccacctaccccaaggagctgaagtccatcttccatgtccga
tccctacacctcggacatgtggctaagagttttggactaagagatgctcctagaaacctc
agtgtctgtactgtgaagaaggcacgcttaaaaaggcctgaccctcggaggaggatccag
aggaggcaccacctcatgcctgctgaagtcctgcactcggaacatgcaagtgggctggag
ggagatggcacgaagggcagaaagcaaggcaagccgcagggccttcagggggcacccagc
aagcctgggctgtggagagaatga
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