KEGG   Apodemus sylvaticus (European woodmouse): 127685149
Entry
127685149         CDS       T10613                                 
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04015  Rap1 signaling pathway
asyl04510  Focal adhesion
asyl04722  Neurotrophin signaling pathway
asyl04910  Insulin signaling pathway
asyl05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    127685149 (Rapgef1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127685149 (Rapgef1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    127685149 (Rapgef1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    127685149 (Rapgef1)
 09160 Human Diseases
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    127685149 (Rapgef1)
SSDB
Motif
Pfam: RasGEF RasGEF_N
Other DBs
NCBI-GeneID: 127685149
NCBI-ProteinID: XP_052037977
LinkDB
Position
5:8648105..8770578
AA seq 1091 aa
MFSFVVVLLAECLLWARCRQLRWHTDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAE
VSKTPEKPTSKEARDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLCWLEEKEKE
VVSALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYSRVY
QSLANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPV
KPSSPASKPDGQPELPLTDREMEILNKTTSVSPSADLLPDSTSEEVAPPKPPLPGIRVVD
NSPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVECYTQRRLSGGSRS
CGGESPRLSPCSSTGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNA
DQTLPQAACSLSPLPESLGESGTPFLGHPFQLPLSSCPQQEGQQTDTPPALPEKKRRSAV
SQTTDSSGCRVSYERHPSQYDNISESDLQNPVPGQPVPYPPFAAILPFQQGASSAPAEFV
GDFSVPESAGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSVFYQTPQSEHIYQQKNRM
LMEVYGFGDAFCGSESTPELAPPPALPPKQRQLELPSGKDGHPRDPSVSSASGKESRENG
ERSPKSLDSLESAQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATE
TDRKDLVLYCEAFLTTYRTFISPEELLKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVV
DELCLVELTEEILKLLMELVFRLVCSGELSLARVLRKNILDKVDQKKLLRCAHSDQPLAA
RGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHF
NNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEW
QRQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGK
VNFSKRWQQFNILDSMRCFQQAHYEIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNI
TRRKTDREEKT
NT seq 3276 nt   +upstreamnt  +downstreamnt
atgttttcatttgttgtagtactgcttgccgagtgtcttctgtgggccagatgccgtcag
ctgcgctggcacacagactcccagcgctctcatctctcctccttcaccatgaagctgatg
gacaaattccactctcccaaaatcaagagaacgccatccaagaagggaaagccagctgag
gtgtcgaagactcctgagaagcccacgagtaaagaggcaagagacagatttctaccagag
ggctaccctatccccttggatctggagcagcaggcagtagaatttatgtccaccagtgct
gtggcttccaggtctcagaggcagaagaacctgtgctggctggaggagaaagagaaggag
gttgtcagtgccttgcgctactttaagaccattgtggacaaaatggccattgataagaag
gttctggagatgctcccagggtcagccagcaaagtgctggaggccatcttacccctggta
cagactgaccctcggatccagcacagctcagccctctcctcctgctatagccgagtatac
cagagtctcgccaacctgatccgatggtctgaccaggtgatgctagagggagtgaactca
gaagataaggagatggtgacgaccgtgaagggtgtcatcaaagctgtgctggatggagtg
aaggagctagtgaggctaaccattgagaagcaggggcggccatcaccaacaagcccagtg
aagcccagttccccagccagcaagcctgacggtcagcctgagctccctctcacagaccga
gaaatggagattctgaacaagacgacaagtgtgtcaccatctgctgacctgctcccagac
tccaccagtgaagaggtcgcgccccccaagccccctttacctggcatccgggtagtcgat
aacagtccaccagcattaccacccaagaagaggcagtctgctccatcccctacccgggtg
gctgtggtcgcccccatgagtcgggctaccagcggctccagtttgcctgttggaatcaat
aggcaggactttgatgttgaatgttacacccagaggcgcctgtcaggaggcagccgctcc
tgcggtggtgagtctcctcgcctgtccccctgcagcagcacaggcaagctcagccggtca
gacgagcagctgtcctctctagacagggatagcgggcagtgctcacggaacacaagctgt
gaaacactagatcactatgaccctgactatgaattcctccagcaagacctctccaatgca
gaccagacccttccacaggcagcctgtagcctcagcccactgccggagtccctgggggaa
tctgggactccatttcttggccaccctttccagctgcctctgagcagctgtccccagcag
gaggggcagcagacagacactccacctgcccttcctgagaagaagcgtaggagcgcagtc
tcccagaccacggacagctctggctgcagggtgtcctatgagcgacacccctcacagtat
gacaacatctcagagagtgacctgcagaacccagtcccaggccagcctgtgccctacccg
ccttttgctgctatcctgccctttcagcagggagcttcctccgcccctgctgagtttgtg
ggtgatttcagtgttcctgagtcagcaggtgacccagagaagccacctcctctaccagag
aagaaaaacaaacacatgctggcctacatgcagctgctggaggactactcagagccacag
ccctccgtgttctaccagacgccgcagagtgagcacatctaccagcagaagaacaggatg
ctcatggaggtctacggctttggcgacgccttctgcggcagcgaatccacaccggagctg
gcccctccacccgctttgccccccaagcagcggcagctggaactgccatctgggaaggac
ggacatcccagagatccctcagtcagcagtgcatctgggaaagagagcagagaaaatggg
gagaggtccccgaagtcactggatagtctggagtcagcccagtcagaagaggaagtggat
gaactgtccctcattgaccacaatgaaattatggccaggttgacactcaagcaagagggt
gatgatgggcctgatgttcgtggaggttcaggagacatcttactggtccatgctactgag
acagacagaaaagacctcgtactgtactgtgaagccttcctgaccacctacaggaccttc
atcagccccgaggagctcctcaagaagctgcagtaccgatacgagaagttctctcccttt
gctgacacattcaagaagcgagtgagcaagaacacattctttgtgctggtgcgagtggtg
gacgagctctgcctggtggagctgacagaggagatcctgaagctgctgatggagctagtc
ttccgcctggtatgcagtggagagctcagcctggccagagttctccggaagaacatcctg
gacaaggtggaccagaagaagctgctcaggtgtgcccattccgaccagcctctggcagcc
aggggtgttgcagccaggccaggaaccttgcatgatttccacagccacgagatagcggag
cagctgacactgctggacgccgagcttttctataagatagagattcctgaagttttgctt
tgggccaaagagcagaatgaggagaagagccccaatctgacccagttcacagagcacttc
aacaacatgtcctactgggtgcgatccatcatcatgctgcaggagaaggcccaggaccgg
gagaggctgctgctgaagttcatcaagatcatgaagcacctgcgcaagctcaacaatttc
aactcctacctggccatcctctcagcgctagactcagcccccatccgcagactggagtgg
cagcggcagacctcagagggcctggctgagtactgcacattgattgacagctcgtcctcc
ttccgagcctaccgggctgccctctcagaggtggagcccccatgtatcccatacctaggt
ctgatcctgcaagacctgaccttcgttcacctgggaaacccagactatattgacgggaaa
gtaaacttctccaagcggtggcaacagttcaacatcttggacagcatgcggtgcttccag
caggcgcactacgaaatccggagaaacgatgacatcataaacttcttcaacgacttcagc
gaccacctggccgaggaagccctgtgggaactctctctgaagatcaagcctaggaacata
acacggcgaaaaacagaccgtgaagagaagacctag

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