Apodemus sylvaticus (European woodmouse): 127685268
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Entry
127685268 CDS
T10613
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127685268 (Gapvd1)
Membrane trafficking [BR:
asyl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127685268 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
127685268
NCBI-ProteinID:
XP_052038219
LinkDB
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Position
5:complement(13657267..13737573)
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AA seq
1458 aa
AA seq
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MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPHKLIERFSPAQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGTEEGD
PRTKNSLGKFDKGCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYISYSQLITLVNF
MKSVMSGDQLKEDRMALDNLLANLPQAKPGKSSSVDMTPYSTPQMSPATTPANRKNRLPI
ATRSRSRSNMLMDLHMDHEGSSQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNVDEDRLQEIAGAAAENVLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDDIAHGAHQLASPPSQSESLLTMFDPLSSHEGASAV
VRPKVHCARPSHPPPDPPILEGAVGGNEARLPIFGSHVLTAAEMEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPSWSRRPGNEELPPAAATGATSLVAAPHSSSSSPSKDSSRGETEE
RKDSDDERSDRSRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDEPSPRL
SAQAQVAEDILDKYRNAIKRTSPSEGAMANDESAEVMGDGESAHDSPREEALQNISADDL
PDSASQAAHPQDSAFSYRDVKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEIVC
FLKVQIAEAINLQDKSLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLTRC
RQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADD
KTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILR
DQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRM
CSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEESYW
WMQFTAAVEFIKTIDDRK
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatattcacacattggcccaccacctcaagcaggagcgcttatatgtg
agctctgagaaacagctcattcagaggctaaatgccgatgtactgaagacagctgaaaag
ctgtatcggacagcgtggattgcaaagcaacagaggattaatttggatcgtcttattata
accagtgctgaagcttcccctgctgagtgttgccagcatgccaaggttttggaagataca
cagtttgttgatggatataagcaactgggatttcaggaaacagcttatggagaattcctg
agtcggttaagggaaaatccgcgtctcattgcctcctctttggttgctggagaaaaactc
aatcaggagaacacacaaagtgttatctacactgtttttacctccttgtatggcaactgt
attatgcaagaagatgaaagctacctccttcaggttttacgatacctgattgaatttgaa
cttaaagaaagtgacaaccccaggcgccttttgaggagaggaacttgtgccttcagcatc
ttatttaaacttttttctgaaggactgttttctgccaaacttttcctgacggctacttta
catgagccgatcatgcagctccttgtagaggatgaagaccacctggaaacagacccacac
aagctaattgagaggttctccccagctcagcaggagaaactcttcggagagaaaggctca
gatagatttaggcaaaaggttcaagaaatggtagattccaatgaggctaaactagtggct
ttggtgaacaaatttattggttatcttaaacagaatacatactgttttccacacagtttg
aggtggattgtatcacagatgtacaaaactctttcttgtgtagacagattggaggttggg
gaggtcagagcaatgtgtaccgatcttcttttggcttgcttcatatgtcccgcagttgtc
aatccagagcagtatggaataatatctgatgctcctattaatgaagtggcaagattcaac
ctgatgcaggttggccgccttttgcagcagttagcaatgactggcactgaagaaggagat
ccccgaaccaaaaatagccttggaaaatttgacaaaggctgtgttgctgctttccttgat
gttgtaattgggggccgtgcagtggagactccgccaatgtcctccgttaatcttctggaa
ggcttgagcagaactgtggtgtatataagttacagtcagcttattactctggtaaatttt
atgaagagtgtgatgtctggagatcagctaaaagaagacagaatggctcttgacaatttg
ttggcaaacctgcctcaggctaagccagggaagagcagcagtgtagacatgactccctac
agcactcctcagatgtctccagccaccaccccagccaacagaaagaaccgcttacctata
gcaacaaggagcagaagccgaagtaatatgttaatggacctacatatggaccatgaagga
tcatctcaagaaactatccaggaggtacagcctgaagaggtgctggtcatttccttaggg
acaggtcctcagctcacaccagggatgatgtcagaaaatgaggttctaaacatgcagctt
tcggatggaggacaaggagatgtccctgttgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggcatatctgaaggtccttcc
aatcgttccaattcagtgtcttctcttgacctggaaggagagtctgtatctgaacttggg
gcaggaccttctgggagtaatggagttgaagcactgcagctgttagaacacgagcaagct
acaacacaagataatcttgatgataaactgaggaagtttgagattcgtgacatgatggga
ctaaccgatgacagggacatatccgagacggtgagtgagacctggagcactgatgtcctg
ggaagtgacttcgacccgaacgttgatgaagatcgtttgcaagagattgcaggtgcagca
gcagagaatgtgttaggcagtttgctgtgccttccaggctcagggtcagtcctccttgac
ccttgcactggctctaccatatcagagaccacaagtgaagcttggagcgtagaggtattg
ccaagtgactcagaggctccagacttaaagcaggaagagcgcctccaagaactggagagc
tgttctggactgggcagcacgtctgatgatacagatgtcagggaggtcagttcccgcccc
agcacaccaggcctcagtgttgtgtccggtataagtgctacatcagaggatattcctaat
aagatcgaagacctgagatctgagtgcagttctgattttgggggtaaagattctgttact
agtccagatatggatgacatagcccatggcgctcaccagctggcctctcctccctctcag
tcagagtctctgctcaccatgtttgacccactgtcctcacatgaaggggcttctgctgtt
gtaaggccgaaggttcactgtgcccggccctcgcatccacctccggatcctccaatcctg
gaaggtgcagtgggaggaaatgaggccaggttgcccatctttggttctcacgttttaact
gcagctgaaatggaggcattcaagcagagacactcttaccctgagagactggttcgcagc
agaagctctgatatagtgtcttctgtgcggcggcccatgagtgaccccagctggagccgg
cgtccagggaatgaagaactccctccagctgcagccactggtgctacttccttggtggct
gcgccccactcgtcatcttcgtccccgagtaaggactcttccagaggagagactgaggag
cgcaaggacagtgatgatgagaggtcagacaggagcagaccttggtggagaaagcgcttt
gtttcagctatgcctaaagctcctataccatttagaaagaaagaaaaacaagaaaaagac
aaagatgatctggggcctgacagattctcaacactcacagatgagcccagccctaggctc
agcgctcaagctcaggttgctgaagatattctggacaaataccgcaatgccattaaacgg
accagccctagtgaaggagcaatggcaaatgatgagagtgcagaggtcatgggtgatggt
gaaagtgctcatgactctcctcgtgaggaagcgctgcagaacatctcagccgacgatctc
cctgactctgccagccaagcagcccaccctcaggactctgctttctcttacagagatgtg
aagaagaagctgaggctcgcactttgttctgcagactctgtggccttcccagtgctaact
cactcaacaaggaacggattgccagaccatacagacccagaagacaatgaaattgtatgc
ttcttaaaagttcaaatagctgaagcaattaatttacaagataagagcttaatggctcaa
cttcaggaaaccatgcgttgtgtgtgccgctttgacaataggacttgtaggaagttgctg
gcatccattgctgaagactacagaaaaagagctccgtatattgcttacctcacccgctgc
cgacaagggctgcagaccacacaggctcacttggaaaggctcctgcaaagagtcttgcgg
gacaaagaggtggccaatcggtactttaccactgtctgtgtgcggttactgcttgagagc
aaagaaaagaagatcagggagttcattcaagactttcagaaactcaccgctgctgacgat
aaaactgctcaggtggaggatttcctgcagttcctgtatggagccatggctcaggatgtc
atatggcagaatgccagtgaggagcagctgcaggacgcccagctggccatcgagcgcagt
gtgatgaatcgcatcttcaagctggctttctaccctaaccaggatggggacatacttcgt
gaccaggttctgcatgaacatatccagagattatctaaagtagtgactgcaaaccacaga
gctctgcagatccctgaggtttatcttcgtgaggcaccgtggccatcagcacagtcagaa
atcaggacaataagtgcttacaaaaccccccgggacaaagtgcagtgcatcctgagaatg
tgctccaccatcatgaacctcctgagcctggccaacgaggactctgtcccaggggcagat
gactttgttcctgtgttggtgtttgtgttgataaaggcaaacccaccctgcctgctgtcc
actgtgcagtacatcagcagcttctacgccagctgtctgtctggagaggagtcctactgg
tggatgcagttcacagcagccgtggagtttattaaaaccatcgatgacagaaagtga
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