Apodemus sylvaticus (European woodmouse): 127685415
Help
Entry
127685415 CDS
T10613
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
127685415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asyl04040
]
127685415
Ion channels [BR:
asyl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127685415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Neur_chan_memb
Zip
FUT8_N_cat
Pns11_12
PFF1_TM
FraC
Motif
Other DBs
NCBI-GeneID:
127685415
NCBI-ProteinID:
XP_052038567
LinkDB
All DBs
Position
5:complement(46417535..46486182)
Genome browser
AA seq
2009 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHTIEKNVTRDY
NGTLVNETLFEFDWKSYIQDTRYHYFLEGVLDALLCGNSSDAGQCPEGYMCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAATASEHSREPSAAGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDDDEFHKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSVASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTEHFNHVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKIATDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGIAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNRKDNCISNHTTEIGKDLDCLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPAEEQPVMEPEETLEPEACFTEGCVQRFKCCQISVEEGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTT
TGDMFEISEVNNHSDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSDYVTSILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPD
CDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRVQMEERFMASNPSKVSYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFTYNKNKLKGGANLLVKEDMLIDRINENSITEKTDLTMSTA
ACPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcagctattgaaaggcgcattgcagaagagaaggctaagaatcccaagccagac
aaaaaggatgatgatgaaaatggcccaaagccaaacagtgacttggaagctgggaagaac
cttccttttatctatggagacattcctccagagatggtgtcagagcccctggaggacctg
gacccctactatatcaataagaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacttctgccctgtacattttaactcccttcaatcctcttagaaaaata
gctattaagattttggtacactcattattcagcatgttaattatgtgcactattttgaca
aactgtgtatttatgacaatgagtaaccctcctgactggacaaagaacgtagagtacacc
ttcacaggaatatatacttttgaatcactaataaaaattattgcaaggggcttctgttta
gaagattttactttccttcgcgacccatggaactggttggacttcactgtcattacattt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcattgagaacattcagagtt
cttcgagcgttgaaaactatctcagtaattccaggcctgaagaccatcgtgggggccctg
atccagtcagtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagcgtc
tttgctctaatcgggctgcagctcttcatgggcaacctgaggaataaatgtgtacagtgg
ccccccaccaacgcttcccttgaggagcataccatagagaagaatgtaactagggattac
aacggcacacttgtaaatgaaaccttgtttgaatttgactggaaatcatacattcaagac
acaagatatcattatttcctggagggtgttttagatgcactactgtgtggaaatagctct
gatgcaggccaatgtcctgaaggatatatgtgtgtaaaagctggtagaaaccctaattat
ggttacacaagctttgataccttcagttgggcatttttgtccctgtttcgactgatgact
caggacttctgggaaaatctttaccaactgacattgcgtgctgctgggaaaacatacatg
atattctttgtgctggtcattttcttgggctcattctacctgataaacttgatcctggct
gtggtggccatggcttatgaggaacagaatcaggccacattggaggaggctgagcagaaa
gaggcggagtttcagcagatgctggagcaacttaagaagcaacaggaagctgcacagcag
gcagcggctgcaacggcatcagaacattccagggagcccagtgcagcaggcaggctctca
gatagctcttcagaagcctccaagttgagttcgaagagtgcaaaagaaaggcggaatcgg
aggaaaaaaaggaaacagaaggagcagtctggaggagaagagaaagatgatgatgaattc
cacaaatctgagtctgaagacagcatcaggaggaaggggtttcgcttctccatagaaggg
aatagactgacatatgaaaagaggtactcttccccgcatcagtctctgttgagtatccgt
ggctccctgttctccccaagacgcaatagcagaacaagccttttcagctttagagggcga
gccaaggatgtgggatccgagaatgatttcgctgatgatgagcacagcacctttgaggat
aatgagagccggagagactcactgtttgttccccgaagacacggagaacggcgcaacagt
aacctgagtcaaaccagcaggtcctcccgaatgctggcggtgtttccagcaaatgggaag
atgcacagcacagtggactgcaatggcgtggtttccttggttggtggaccctcagttcct
acatcgccagttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatggaacaaccactgaaactgagatgagaaagcggaggtcaagctctttccatgtttcc
atggactttctagaagatccttcccagaggcaacgagcaatgagcgtagccagcatctta
acaaatacggtggaagaactagaagaatccaggcagaaatgcccaccctgttggtataaa
ttttccaacatattcttaatttgggactgttctccatattggctaaaagttaagcatatt
gtcaacctggtagtgatggatccatttgtcgacctggccatcactatctgcattgtgtta
aatacactgttcatggctatggagcactaccccatgactgagcacttcaaccatgtactc
acagtgggaaacttggttttcactgggatcttcacagcagaaatgttcctgaaaatcatt
gccatggacccttactattatttccaagaaggctggaatatctttgatggtttcattgtg
acactcagcctggtagaacttggccttgccaatgtggaaggattgtcagttctccgctca
tttagactgctgcgagtgttcaagttggcaaaatcctggcccacactgaatatgctaatt
aagatcattggcaactcagtgggcgcactgggcaacctgaccctggtgttggccatcatc
gtcttcatttttgccgtggtcggcatgcagctatttggcaaaagttataaagattgtgtc
tgcaaaattgccactgactgcaaactcccacgctggcacatgaacgacttcttccactcc
ttcctgatcgtgttccgtgtgctgtgtggagagtggatagagaccatgtgggactgcatg
gaggtcgcgggccaagccatgtgcctcactgtcttcatgatggtcatggtgattgggaac
cttgtggtcctgaacctctttctggccttgcttctgagctcatttagtgcagacaacctt
gcagccactgatgatgacaatgaaatgaacaaccttcagattgctgtggacaggatgcac
aaaggaatagcttatgtaaaaagaaaaatatatgaatttattcaacaatcctttgtcagg
aaacagaagattctagatgaaattaagccacttgacgatctaaacaacagaaaagacaat
tgtatatctaaccacacgacagaaattgggaaagatttggactgtctgaaagacgtaaat
ggaaccacaagtggcatagggactggcagtagcgtggaaaagtacatcattgatgagagt
gattacatgtcatttataaacaaccccagcctcaccgtgaccgtgcccattgctgtggga
gagtctgactttgaaaacttaaacacggaggactttagcagtgaatcagatctggaagaa
agcaaagagaaactcaatgaaagcagtagctcctctgagggaagcacagtagacatcggg
gcgcccgcagaggaacagcctgtcatggaaccagaagaaacccttgagcccgaagcttgc
ttcactgaaggctgtgtacagagattcaagtgctgtcaaatcagcgtggaagaaggaaga
gggaaacaatggtggaacctgcggagaacgtgcttccgaatagttgagcacaactggttt
gagaccttcattgtgttcatgattctcctcagtagtggtgccttggcctttgaggatata
tatattgatcagcgaaagacgatcaaaaccatgctggagtatgctgacaaagtcttcact
tacatcttcatcctggagatgctgctcaaatgggtagcctatggctatcaaacctatttc
accaatgcatggtgctggctggacttcttaattgttgatgtttcattggtcagtttaaca
gcaaatgccttgggttactctgaacttggggccatcaaatccctaaggacactaagagct
ctgagacccctacgagctttatcacgatttgaagggatgagggtggttgtgaatgccctg
ttaggagcaattccatccatcatgaatgtgcttctggtttgccttatattctggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctaccactgtgttaacaccacc
actggtgacatgtttgagatcagcgaagtcaataatcattctgattgcctaaaactaata
gaaagaaatgagaccgcccggtggaaaaatgtgaaagtaaactttgataatgtaggattt
gggtatctttctttgcttcaagttgccacgtttaagggttggatggatatcatgtatgca
gcagttgattccagaaatgttgagctgcagcctaagtatgaggagagcctgtacatgtat
ctgtacttcgtcatcttcatcatctttgggtccttcttcaccctgaacctcttcatcggt
gtcatcatcgacaacttcaaccagcaaaagaagaagtttggaggtcaagacatctttatg
acagaagaacagaagaaatactataatgcaatgaagaaattgggatctaaaaagccacaa
aagcctatccctcgacctggaaacaaatttcaaggaatggtcttcgactttgtaaccaga
caagtgtttgacatcagcatcatgatcctcatctgtctgaacatggtcaccatgatggtg
gaaacggatgaccagagtgattatgtaacaagcattttgtcacgcatcaacctggtattc
attgtgctattcactggcgagtgcgtgctcaagctcatctccctccgccattattatttc
accatcggatggaatatttttgattttgtagtggtcatcctctccattgtaggaatgttc
cttgccgagctgatagagaagtatttcgtgtcccctaccctgttccgagtcatccgcctg
gccaggattggacgaatcctacgcctgatcaaaggcgccaaggggatccgcactctgctc
tttgctctcatgatgtctcttcctgcactgttcaacatcggcctcctgcttttcctggtc
atgttcatctatgccatctttggcatgtccaactttgcctacgtgaagagggaagttggg
attgatgacatgttcaactttgagacctttggcaacagcatgatctgcttgttccaaatc
accacctctgcaggctgggatggactgctggcccccatcctcaacagcaaaccccctgac
tgtgaccctaataaagttaaccctggaagctcagtgaagggggactgtggaaatccatct
gtggggattttcttttttgtcagctacattatcatatccttcctggttgtggtgaacatg
tacatcgctgtcatcctggagaacttcagcgttgccacagaagaaagtgcagagcccctg
agtgaggacgactttgagatgttctacgaggtctgggagaagttcgaccctgacgccact
cagttcatggaatttgaaaaattatctcagtttgcagctgctcttgaaccccctctcaat
ttgccacaaccaaacaaacttcagctcatagccatggacctgcccatggtgagtggagac
cgcatccactgcctggacatcttatttgcttttacaaagcgggtcctgggtgagagtgga
gagatggacgcccttcgagtccagatggaagagcggttcatggcttccaacccctccaag
gtctcctatcagccaatcactactacattaaaacgcaaacaggaggaggtgtcagctgtc
atcattcagcgagcttacaggcgccaccttttgaagcgaacagtaaaacaagcttccttc
acatacaataagaacaaactcaaaggtggggctaatcttcttgtaaaagaagacatgctc
attgacaggataaacgaaaactctattacagagaaaactgacctgacaatgtccactgca
gcttgcccgccctcctacgatcgggtgactaagccaatcgtggagaaacatgagcaggaa
ggaaaagatgaaaaagccaaagggaaatga
DBGET
integrated database retrieval system
