Apodemus sylvaticus (European woodmouse): 127685469
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Entry
127685469 CDS
T10613
Symbol
Trub1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asyl03016
]
127685469 (Trub1)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
127685469 (Trub1)
Transfer RNA biogenesis [BR:
asyl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127685469 (Trub1)
Prokaryotic type
127685469 (Trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
127685469
NCBI-ProteinID:
XP_052038673
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All DBs
Position
1:complement(3761898..3797272)
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AA seq
339 aa
AA seq
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MAAAEIEVVSPVILDTSPDTLGSSAASVATEVAAAARTGSQAQVSKAALAAKLMSLSGVF
AVHKPKGPTSAELLNRLKEKLLAEAGMPSPERNKRQKQTLKVGHGGTLDSAAQGVLVVGI
GRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQEDIEGILQKFTGN
IMQVPPLYSALKKDGQRLSTLMKRGKVVEARPARPVTVHSISLLEFQPPFFTLDVECGGG
FYIRSLVSDIGKELSSCASVLELTRTKQGPFTLAQHALPEDRWTIDDIARSLEACTSTLL
PEELTSKKSRSENSSDQVLSCGYITLRETEREDDTAKTL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcggagatagaggttgtttcacctgtgattctggacacatccccagacact
ttaggatcatccgcggcctctgtagccacagaggtagctgcggcggccaggactggatcg
caagcccaggtctccaaggccgccctggctgctaagctcatgtcgctcagcggcgtgttc
gccgtgcacaagcccaaaggacccacttcagccgagctgctgaaccggctgaaggaaaag
cttctggcagaagctggaatgccttctccagaacggaacaagaggcaaaagcagacactg
aaagtcggacacggagggactctggacagtgcagcgcaaggtgttctggtggttgggatt
ggaagaggaacgaaaatgttgaccagtatgttgtcggggtccaagaggtacatcgccatc
ggagaactggggaaagctacggacacgctggattctaccgggaaggtaacagaagagaag
ccatatgataaaataacacaagaagatatcgaaggcattctgcagaagtttactgggaat
ataatgcaagtaccccccctctattctgcgctgaagaaggatggacagagactctcaacg
ctaatgaagaggggcaaagtggttgaggccagaccggccaggccagtgaccgtccacagc
atctccctcctggagttccagccgccgttcttcacgctagatgttgaatgcggaggaggc
ttttacatccgaagcctggtcagtgacattggcaaagaactctcttcttgtgccagtgtg
ctggagctgacccgcaccaaacaggggccctttacgcttgcacagcacgccctccccgag
gacagatggaccatcgatgacatcgcacggtccctggaggcctgcacgtcgacccttctg
ccagaggagctgacgtctaagaaatcaagatccgagaactccagtgaccaggttttaagc
tgtggatatataactctcagggagacagagagagaggatgacacagcgaagacactttga
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