Apodemus sylvaticus (European woodmouse): 127685495
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Entry
127685495 CDS
T10613
Name
(RefSeq) tetratricopeptide repeat protein 30A1
KO
K19683
tetratricopeptide repeat protein 30
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127685495
Cilium and associated proteins [BR:
asyl03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
127685495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_7
TPR_16
ANAPC3
TPR_CcmH_CycH
TPR_14
TPR_Slam
TPR_8
SRP_TPR_like
ARM_TT21_C
TPR_6
TPR_11
DUF285
AF1548-like_C
TPR_17
Motif
Other DBs
NCBI-GeneID:
127685495
NCBI-ProteinID:
XP_052038717
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All DBs
Position
5:complement(56324838..56327564)
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AA seq
664 aa
AA seq
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MAWQSNSKVPDGEFTAVVYRLIRDSRYSEAVQLLSAELQRSSRSRAGLSLLAYCYYRLQE
FELAAECYEQLSQMHPELEQYRLYQAQALYKACLYPEATRVAFLLDNPTYQTRVLRLQAA
IKYSEGDLPGARSLVEQLLSGEAGEDSGGENDPDSLVNLGCLLYKEGHYEAACSKFLAAL
QASGYQPDLSYNLALAYYSSRQYAPALKHIADIIERGIRQHPELGVGMTIEGIDIRSVGN
TAVLHQTALVEAFNLKAAIEYQLRNFEVAQETLTDMPPRAEEELDPVTLHNQALMNMDAK
PTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYDF
LDAMITCQTAPEEAFIKLDGLAGMLTEQLRRLTKQVQEARHNRDDEIIKKAVNEYDETLE
KYIPVLMAQAKIYWNLENYTMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIGF
YEPIVKKNYDNILSVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYDDPDKKIY
HLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYHKKLGTDTWYYAKRCFLSLLENMSKHM
IVLCDGVVQECVQFLEHCEIFGRNIPAVLEQPLEEERIHTGKNTVTYESRLLKALIYEII
GWNM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcctggcaaagcaactctaaagtccccgacggtgagttcactgcggtggtgtacagg
ctcatccgcgactcccgctactcagaggcggtgcagctgctgagcgcagagctgcagagg
agctcccgcagccgcgcagggctgtcgctgctggcctactgttactaccgcctgcaggag
ttcgagctcgctgcagagtgctatgagcagctgagccagatgcacccagagctcgagcag
taccgcctgtaccaggcccaggcgctgtacaaggcctgcctgtatccagaggccaccagg
gtcgccttcctcctggacaaccccacctatcagactcgagtccttcgtctccaggctgct
atcaagtacagtgaaggtgacctcccaggagccaggagcctggtggagcagctgctgagt
ggggaagctggagaagacagtggaggggagaatgacccagatagtttggtcaacctgggt
tgtctgctctacaaggagggacactatgaagctgcctgctccaagttcttagcggccctg
caggcttctggctaccagcctgacctttcctacaacttggctttggcctattacagcagt
cggcagtatgcacctgctctgaagcatatcgctgacatcattgagcgtggcatccgtcaa
cacccagaactcggcgtgggcatgacaattgaaggcattgatattcgaagtgttggcaac
actgcagtccttcaccagactgctctggtcgaagccttcaacctcaaggcagccatagag
taccagctgagaaactttgaggtagcccaagaaacactcactgacatgccacccagagca
gaggaagagttggaccccgtgaccctgcacaatcaggctctgatgaacatggatgccaag
cccacggagggctttgaaaagctacagtttctgctccagcagaaccccttccccccagag
acatttggcaacctgttgctgctttactgtaaatatgagtattttgacctggcagctgat
gttctagcagaaaatgcccacttgacttacaagttcctcacaccctatctctatgacttc
ttggatgccatgatcacctgccagacagctcctgaggaggctttcattaaacttgatggg
ctggctggcatgctgactgagcagctcaggagactcactaagcaagttcaagaagcaagg
cataacagagatgatgaaattattaaaaaagctgtgaatgaatatgatgaaacccttgag
aaatatatccctgtactgatggcccaggcaaaaatctactggaatcttgagaattacaca
atggtggagaagatcttccgcaaatctgtggaattctgtaatgaccacgatgtgtggaag
ctgaatgtggcccatgtcctcttcatgcaggaaaacaagtacaaagaggccattggtttc
tacgagcccattgtcaagaagaattacgataacatcctgagtgtcagcgctatcgtgcta
gccaacctctgtgtttcctatatcatgacaagtcagaatgaagaagctgaggagctgatg
aggaagattgagaaggaggaggaacaactctcttatgatgacccagacaagaaaatctac
cacctttgcattgtgaatttggtgataggaaccctgtattgtgccaaaggaaactatgac
tttggcatctctcgggttatcaaaagcctggagccttaccataaaaagctaggcactgat
acgtggtattatgccaaaagatgcttcctgtccttactagaaaacatgtctaagcacatg
atagtgctttgtgatggtgttgttcaagaatgtgtccagtttctagagcattgtgaaatt
tttggcagaaacatccctgctgttctagaacagcccttggaggaagaaagaattcacacc
gggaagaatacagtcacatatgagtccagactgttgaaagctttgatttatgagatcata
gggtggaatatgtag
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