Apodemus sylvaticus (European woodmouse): 127685668
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Entry
127685668 CDS
T10613
Symbol
Cd44
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04512
ECM-receptor interaction
asyl04640
Hematopoietic cell lineage
asyl05169
Epstein-Barr virus infection
asyl05205
Proteoglycans in cancer
asyl05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127685668 (Cd44)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
127685668 (Cd44)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
127685668 (Cd44)
05205 Proteoglycans in cancer
127685668 (Cd44)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
127685668 (Cd44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asyl04147
]
127685668 (Cd44)
04090 CD molecules [BR:
asyl04090
]
127685668 (Cd44)
00535 Proteoglycans [BR:
asyl00535
]
127685668 (Cd44)
00536 Glycosaminoglycan binding proteins [BR:
asyl00536
]
127685668 (Cd44)
Exosome [BR:
asyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127685668 (Cd44)
Exosomal proteins of other body fluids (saliva and urine)
127685668 (Cd44)
Exosomal proteins of colorectal cancer cells
127685668 (Cd44)
Exosomal proteins of bladder cancer cells
127685668 (Cd44)
CD molecules [BR:
asyl04090
]
Proteins
127685668 (Cd44)
Proteoglycans [BR:
asyl00535
]
Cell surface proteoglycans
Others
127685668 (Cd44)
Glycosaminoglycan binding proteins [BR:
asyl00536
]
Hyaluronan
Cell surface receptors
127685668 (Cd44)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Motif
Other DBs
NCBI-GeneID:
127685668
NCBI-ProteinID:
XP_052039051
LinkDB
All DBs
Position
5:complement(84676899..84765429)
Genome browser
AA seq
537 aa
AA seq
DB search
MDKFWWHTVWGLCLLQLSLAQQQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNS
TLPTMAQMEVALNKGFETCRYGFIEGNVVIPRIHPNAICAANHTGVYILLTSNTSHYDTY
CFNASAPLEEDCTSVTDLPNSFEGPVTITIVNRDGTRYSKKGEYRTHQEDIDASNTIDDD
VSSGSAIEKSTSEGHIFHTSFPTAEPTGDQDDTFFIRSTLATTSAHNNHPSQRITTQSQE
DVSWTNFFDPISHPMGQGHQTESKDTDSSHSTTIQPTAAPNTHLVEDLDRTGPLSVTTPQ
SHSQNFSTLPGELEEDEDHTTSILPSSTKSGGKDARRGGSLPRDTTTSLEGYTPHYPDTM
ENRTLFPVTPVQTEVFGETEVTVAMDSNFNVDGPIPGDRDSSMDPSGGSRTVTHGSESAG
HSSGNQDSGVTATSGPARRPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVIN
SGNGTVEDRKPSELNGDASKSQEMVHLVNKEPSETPDQFMTADETRNLQSVDMKIGV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttttggtggcacacagtttggggactttgcctcttgcagttgagcctggca
cagcagcagatcgatttgaatgtaacctgccgttatgcaggtgtattccatgtggagaaa
aatggccgctacagtatttcccggactgaggcagctgacctctgccaggctttcaatagc
accttgcccaccatggcccagatggaggtggccctgaacaaggggtttgaaacctgcagg
tatgggttcatagagggaaatgtggtaatcccgaggatccaccccaacgctatctgtgca
gccaaccacacaggagtgtatatcctcctcacatccaacacctcccactatgacacctat
tgcttcaatgcctcagctcctcttgaagaagactgtacatcagtcacagacctacccaat
tcctttgaaggaccagttaccataactattgtcaaccgtgatggtacccgctacagcaag
aagggcgagtatagaacacaccaagaagacatcgatgcctcaaatactatagatgatgat
gtcagtagcggctccgccatcgagaagagcacctcagaaggccacatcttccacacctcc
tttcccactgcagagcctactggagaccaggatgacaccttctttatcaggagcaccttg
gccaccacctcagcccacaacaaccatccaagtcaaagaataacaacacagagtcaagag
gacgtgtcctggacaaatttcttcgacccgatctcacatccaatgggacaaggtcatcaa
acagaaagcaaggatacagattccagtcatagtacaaccattcagcctactgcagctcca
aatacccatttggtggaagacttggacaggacaggaccactttcagtaacaactccacag
agtcattctcagaacttctctacattacctggagagctggaagaagatgaagaccataca
acttctattctgccatctagcactaagagtggtggtaaagatgcaagaagaggtggaagt
cttcccagagatacaactacttcactagaaggctacacacctcattacccagacacaatg
gaaaacaggactctcttcccagtgacccctgttcagactgaggtctttggagaaactgaa
gtgactgttgctatggactccaactttaatgttgatggccccataccaggagatagagac
tcatccatggaccccagtgggggttcccgaactgtgactcatggatccgaatcagctgga
cactcaagtgggaatcaagacagtggtgtgaccgcaacttctggtcctgcacgtagacct
caaattccagaatggctcatcatcttggcatccctcctggcactggctctgattctcgcc
gtttgcattgctgtcaacagtaggagaaggtgtgggcagaagaaaaagctggtgatcaac
agtggcaatggaacagtggaggacaggaaaccaagtgaactcaatggggatgccagcaag
tctcaggaaatggtgcatttggtgaacaaggaaccatcagagactccggaccagttcatg
acagctgacgagacccggaatctgcagagtgtggacatgaagattggggtttag
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integrated database retrieval system
