Apodemus sylvaticus (European woodmouse): 127685687
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Entry
127685687 CDS
T10613
Symbol
Cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127685687 (Cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127685687 (Cstf3)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127685687 (Cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
127685687
NCBI-ProteinID:
XP_052039081
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All DBs
Position
5:86446506..86523102
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AA seq
717 aa
AA seq
DB search
MSGDAAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFREEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESSTVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacgcagccgcggagcaggcagctgaatatgtcccagagaaggtgaagaaa
gcggaaaagaaattagaagaaaatccatatgaccttgatgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttacgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagctatttcaaagatgccttatgaaggttttgcacattgatttg
tggaagtgttatctttcctacgtcagagaaaccaagggtaaactgccaagttacaaagaa
aaaatggctcaagcttatgactttgcactggataaaattggaatggaaattatgtcctat
cagatttgggtggattacatcaatttcttaaaaggcgtggaagctgtaggatcttatgca
gaaaatcagagaataactgctgtccgaagagtttatcaacgaggttgtgttaatccgatg
atcaacattgaacaactctggagagactacaacaagtatgaagagggtatcaatattcat
ttagctaaaaagatgattgaagatcggagtagagactacatgaatgctagacgtgtagca
aaggagtacgagacagtaatgaaaggtttagatcgcaatgctccttcagtgcctcctcag
aacactcctcaagaggctcagcaggtggacatgtggaagaagtatatccagtgggaaaag
agcaaccctctgcgcacggaggaccagaccctgataacgaaaagagttatgtttgcctat
gaacagtgcctacttgtgctgggccatcaccctgatatctggtatgaagctgcccagtat
ctggaacagtcaagtaagctgcttgcagaaaagggggatatgaacaatgccaaattattt
agtgatgaagctgctaacatatacgaaagagccataagcactctactaaagaagaacatg
ctcctttattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaggttcac
agtatatataacagacttctggcaattgaggacattgaccccaccttggtatatattcaa
tatatgaaatttgcaagaagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaggatgccagaacccgccatcatgtctatgtgactgcagcacttatggagtat
tactgtagtaaggacaaatctgttgcctttaagatttttgaattgggactaaagaaatat
ggagacattccagaatatgttttggcttatattgactatctctctcacctcaatgaggac
aataatactcgagttttgtttgaaagagttttaacatctggaagccttccccctgagaag
tctggagaaatctgggctcgatttctagcttttgaaagtaatattggtgatttagctagt
atactcaaagtggagaaaagacggtttacagcattcagagaagagtatgaaggcaaagaa
acagctttattggtggacagatataagtttatggatttatacccttgttctgcaagtgaa
ctcaaagcactgggctacaaggatgtctcccgtgctaagctagctgctataattccagac
ccagttgtagctccttccatagtgcctgttctgaaagatgaagtggatagaaaacctgag
taccctaagccagacactcagcagatgattccatttcagccacgacatttagcacctcca
ggcttacacccggtgcccggtggggtgtttcccgtgcctcctgctgctgttgttttaatg
aaactgctccctcctcctatctgcttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaacactgttgaggaagccgtgaggatcatcact
ggtggggccccagagctggctgtggaaggcaatgggccagtggaaagcagtactgtactg
actaaggctgtcaaacggcccaacgaggattcagacgaagatgaagaaaagggggccgta
gtccccccagttcatgacatttacagagcgcggcagcagaaacgaatacgatga
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