Apodemus sylvaticus (European woodmouse): 127685719
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Entry
127685719 CDS
T10613
Symbol
Aqr
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127685719 (Aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asyl03041
]
127685719 (Aqr)
Spliceosome [BR:
asyl03041
]
Complex B
Other components
Prp19-related factors
127685719 (Aqr)
Complex C
127685719 (Aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
SLFN-g3_helicase
DEAD
Parvo_NS1
UvrD_C_2
AAA_16
AAA
DnaB_C
PhoH
DUF4088
NB-ARC
AAA_22
ATPase
Motif
Other DBs
NCBI-GeneID:
127685719
NCBI-ProteinID:
XP_052039141
LinkDB
All DBs
Position
5:complement(96540938..96621741)
Genome browser
AA seq
1484 aa
AA seq
DB search
MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEEIYEKEIVKSRFA
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFP
FFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQP
ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSIPLSE
PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSSLVHREEDGHLFSQ
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD
ARDSLVKFFGPLCSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT
INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM
LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYDTFNVIMRRK
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLS
IEHLKASFPGHNVKVTVNDPALQIPPFRITFPVRSGKGKKRKDADGEEDDTEEAKTLIVE
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYMSRLKNTGSTCPD
AAEVATLFPFQEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
SQLTARPLHLHIIPTEPFPTSRKNGERPPHEVQVIKNMPQMANFVYNMYMHLIQTTHHYH
QTFLQLPPAMVEEGEEVQSQETEMEAEEETTSAQANLTPSPTDASPSQEIPASQPDCSSQ
TEAACSQTEDTSALCDIATAAEPVSAAAEATTPQDVDSVPAETK
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctgcgcagcccaagaaaatcgtggcacccacggtgtcccagatcaacgcg
gagttcgtcacccagctagcatgtaaatactgggctcctcatatcaagaagaaatcacct
tttgatataaaagtaattgaagaaatatatgaaaaagagatcgtcaaatcacggtttgcc
atcagaaaaataatgctgctagaatttagccaatatcttgaaaattatctttggatgaat
tattctccagaagtttccagcaaggcctatttaatgtccatctgctgtatggtgaatgag
aagttcagagaaaatgtcccagcctgggagacttttaagaagaagccagaccacttcccg
ttcttttttaagtgcatcttgaaagctgcgttggctgagactgatggcgagttctccctc
cacgagcagaccgtccttctgcttttcctggatcactgcttcaatagcttggaggtagac
ttgatcaggagtcaggtccagcagcttatctccctcccgatgtggatgggcttacagcct
gcacgattggaattagaattgaaaaagacaccaaagctaagaaagttctggaacttgatt
aaaaagaatgatgaaaagatggacccagaagcaagagagcaggcctaccaagaaagaagg
tttctttcccagctcatccagaagttcatctctgtgttgaagtccatcccactttctgag
ccggtcactatggacaaagttcattactgtgagagattcatcgagcttatgattgaccta
gaggctctgcttcccacacggcgctggtttaacaccatcctggacgactcccaccttttg
gttcactgttacctttccagtctcgttcacagagaagaggatggccacctgttttcccag
cttttggacatgctgaagttctatactggctttgaaattaacgaccagactggaaatgct
ctgacagagaacgagatgaccacaattcactatgacagaataacatctctgcagagggcc
gctttcgcacacttcccagagctctacgactttgccctctccaatgtggcagaagtagat
gcccgcgattccttggtcaagttttttgggcctctgtgttcaaacacactccaccaggtg
gcatcatacctctgcctcttgccaacactccctaaaaatgaagacacaacttttgataaa
gaatttcttctagaattgctggtgtctcgccatgaacgccgcatctcccaaattcagcaa
ttgaatcagatgcctttgtatccaacggagaaaattatatgggatgaaaacatcgtccct
acagagtactattctggggaaggctgtcttgctctccccaagttgaatttgcagttttta
actctacatgactatctcctgaggaactttaatctcttccgcttagaatcgacttatgaa
attagacaagacatcgaggacagtgtcagcagaatgaagccatggcagtctgagtatggt
ggcgtagtgttcggtggttgggcacgcatggctcagcccattgtggctttcactgtcgtc
gaggttgccaaacccaacattggtgaaaactggccaacccgcgtccgtgcagatgtcacc
atcaatctgaatgtcagagaccacatcaaggatgagtgggaaggtcttcgcaagcacgat
gtatgctttctaattactgtgcgtcctacaaagccttacggcactaagtttgacaggagg
agaccttttattgagcaagttggtctggtgtacgtcagaggctgtgaaatccagggcatg
ctggatgacaaagggcgagtcatcgaagatggaccagaacccagacccaatcttagagga
gagtcaaggacatttcgagtatttttggatccgaaccagtatcaacaggatatgaccaat
acgatacaaaatggagccgaagatgtgtatgacactttcaatgtcataatgcggaggaag
ccgaaggagaataacttcaaggctgtgttggagactattcggaatctgatgaataccgac
tgcgtggtaccagactggctgcatgacatcattttaggctatggggacccaagtagtgcc
cattattcaaaaatgcccaatcagattgccacgctggatttcaatgacacttttctctcc
attgaacatttaaaggccagctttcctggtcataatgtcaaagtgactgtgaatgaccca
gctctccaaataccccctttcagaataactttcccagtaagaagtggaaaggggaagaaa
agaaaagatgcagatggggaagaagacgacacagaagaagcaaagaccttaattgtggaa
cctcatgttattcctaatagaggtccttatccttacaaccaacccaaacgtaatacaatc
cagttcactcacacacagattgaggccatccgggccggaatgcagcctggactcactatg
gttgtgggcccacctggtacaggaaaaacagatgttgcagtccagatcatttccaacatt
taccacaattttccagaacaaaggactttaattgttactcattccaatcaggctctgaac
cagttgtttgagaaaatcatggctttagacattgatgagcgccatctcctgcgtctgggt
catggagaagaagagctagagacagagaaagacttcagcaggtatggaagagtcaattat
gtcctggctcgaagaatagaacttttagaagaagtcaaacgattacaaaagagtctaggg
gttcccggagatgcttcatatacctgtgaaactgcaggctatttcttcttatatcaggta
atgtcccgttgggaagaatacatgagcagactgaagaacacagggagcacctgcccagac
gccgccgaggtcgccacgctcttccccttccaggagtactttgccaacgcgcctcagccc
atcttcaaaggcagatcttatgaagaagacatggaaatcgctgaagggtgcttcaggcat
attaagaaaatcttcactcagcttgaggaattcagagcctcagaactacttcgtagtgga
ctggacagatctaaatacctcctggtgaaagaagccaaaatcattgccatgacgtgtact
catgctgccttaaaacggcatgacctggtcaagttgggtttcaagtatgacaacatttta
atggaagaggctgctcagattttggagatagaaacctttatccctcttcttctgcagaat
cctcaagacggattcagccgattgaagcgatggattatgattggtgatcaccaccagttg
cctccagtcatcaagaacatggcctttcagaagtattccaacatggagcagtctcttttc
actcgctttgtccgggttggagttcctaccgtggacctcgatgctcaaggaagagccagg
gcaagcttgtgtaacctctacaactggcgttacaaaaacctagggaacttgccacacgtg
cagctcctgccagagttcagcacagccaacgcgggcctgctgtacgacttccagctcatc
aatgtggaagactttcagggcgtgggggagtcggagcctaacccttacttctaccagaac
cttggagaggcagagtatgtagtggccctcttcatgtacatgtgcttgcttggttaccct
gcagacaagatcagtatcctaacaacctacaatgggcagaagcacctgattcgggacatc
atcaacaggcgctgtggaaataatccactgattggaagaccaaacaaggtgacaactgtt
gatagattccaaggtcaacagaatgattatatcctcctttctctagtgcggaccagggct
gtgggccatttgagggatgtgcgtcgcttggtggtagccatgtcaagagccaggcttggc
ctttacatcttcgctagagtatccctcttccagaattgctttgagctgactcctgctttc
agccagctcactgcccgcccactgcatttgcatattattccaacagaacctttcccaacc
tccagaaagaatggagagagaccacctcatgaagtgcaggtgataaaaaatatgccccag
atggcgaattttgtgtacaatatgtacatgcatttgatacagactacccatcattatcat
cagactttcttacaactgccacctgccatggtggaagaaggtgaggaagttcagagccaa
gaaacagaaatggaagcagaggaagaaaccacatctgctcaagctaacctcacacccagt
ccaacagatgccagcccgagtcaagagatcccagcctctcagcctgactgctccagtcag
actgaagctgcctgcagtcagacagaagacacctctgccctgtgtgacattgctactgca
gctgagcctgtctctgcagcagcagaagccaccaccccacaagatgtggattctgtccct
gcagagaccaagtag
DBGET
integrated database retrieval system
