Apodemus sylvaticus (European woodmouse): 127685755
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Entry
127685755 CDS
T10613
Symbol
Vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04140
Autophagy - animal
asyl04148
Efferocytosis
asyl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127685755 (Vps18)
04148 Efferocytosis
127685755 (Vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127685755 (Vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127685755 (Vps18)
Membrane trafficking [BR:
asyl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127685755 (Vps18)
Hops complex
127685755 (Vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf_RING_Vps8
WD40_Prp19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
127685755
NCBI-ProteinID:
XP_052039228
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All DBs
Position
5:101915678..101927207
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQTGCPSVGIPHSGYVNAHLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKASEPNRVELGRKDDAKVHKLFLDHTGSHLLIALSSTE
VLYLNRNGQKARPLARWKGQLVESVGWNKAHGNESTTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRCFVIATTRQRLFQFIGRAVEDAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPAGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPTERTQATLLTTWLTELYLSRLGALQGDPDALNLYRDTRECFRTFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPTKGSAKAKEAEAGAAAVGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccattctggatgagtatgaggactcactgtcccgctcggccgtcttgcagact
ggttgccctagcgtgggcatcccccattctgggtatgtaaatgcccacctggagaaggag
gtgcctatcttcacaaagcaacggattgacttcaccccctccgagcgaatcaccagcctt
gttgtttcctgcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggcaaggccagtgaacccaaccgcgtggaactggggcgcaaggatgatgccaaagtc
cacaagctgttcctggaccataccggttctcatctgctgatcgctctgagtagcaccgag
gtcctttacttgaaccgcaatggacagaaggcccggccgctggctcgttggaaggggcag
ctggtggagagcgtgggctggaacaaagcccacggcaacgagagcaccaccggccccatc
ctggtcggcacagcgcagggacagatctttgaggcggagctctcagctagcgaaggtggc
ctcttcggccctgccccggatctctacttccgtccactgtacgtgttaaatgaggaaggg
ggtccagcccccgtgtgctccctcgaggctgagcgtggccctgatggacgatgctttgtc
attgccaccacacggcagcgcctctttcagttcataggccgagcagtggaggatgccgaa
gcccagggcttctcggggctctttgctgcctatacagaccacccacccccattccgcgag
tttcctagcaacctggggtatagtgagttggctttctatacgcctaagttacgctctgct
cctcgcgccttcgcctggatgatgggagatggtgtgctgtatggctccctggactgcggc
cgtcctgactccctgctgagtgaggagcgagtgtgggaatacccagctggggttggtcct
ggggccagtccacccttagccatcgtcctgacccagttccatttcctgctgctgctggca
gaccgggtggaggctgtgtgcacgctgacggggcaggtggtgctacgggatcacttcctg
gagaagtttggaccactgaggcacatggtgaaggactcgtccacaggtcacctgtgggcc
tacactgagcgcgcagtcttccgctaccatgtgcagcgtgaggctcgggatgtgtggcgc
acctacctggatatgaaccgctttgacctggccaaggagtattgtcgagagcggcctgat
tgcctggacacggtcctggcccgagaggctgatttctgctttcgccagcatcgctacctg
gagagtgcccgctgctatgctctgacccagagctattttgaggagattgccctcaagttt
ttggaggcccggcaagaggaggcgctggccgagtttctacagcggaaactggccggcttg
aagccgactgaacgtacccaggccacactactgaccacttggctgacagagctctacctg
agccggctcggtgctctgcagggcgacccggatgctctgaatctctaccgggacacacgg
gagtgcttccgtaccttcctcagtagccctcggcacaaagagtggctctttgccagccgg
gcctccatccatgagctgctcgccagtcatggggacacggagcacatggtgtattttgca
gtgatcatgcaggactacgaacgggtggtcgcataccactgccagcacgaggcctacgag
gaggccctggctgtgcttgcccgccaccgtgacccccagctcttctacaaattctcaccc
atcctcatccgacatatccctcgccagttagtggatgcctggattgagatgggcagccgg
ctggatgctcggcagctcatccctgccctggtgaactatagccagggtggcgaggcccag
caggtgagccaagccatccgctatatggaattctgcgtgaatgtgcttggtgagaccgag
caggccatccacaactacctgctgtcactgtatgcccgcggccagccagcctcacttctg
gcctatttggagcaagctggcgctagcccacaccgtgtacattacgatctcaaatacgca
cttcgactttgtgctgagcacggccaccaccgcgcctgcgtccacgtctataaggtgttg
gagctgtatgaggaggctgtggacttggccctgcaggtggatgtggacctggccaagcag
tgtgcagatttgccagaggaagatgaggaacttcgcaagaaactatggctcaagatcgcc
cggcacgtggtgcaggaggaggaagacgttcagacagccatggcctgcttggccagctgc
cccttgctcaagatcgaggatgtgctgcccttctttcctgactttgtcacaatcgaccac
ttcaaggaagccatctgtagttcactcaaggcctacaaccaccatatccaggagctgcag
cgcgagatggaagaggccacagccagtgcccagcggatccgacgagacttgcaggagctt
cgcgggcgctacggcacggtggagccccaggacaaatgctccacctgcgacttccctttg
ctcaaccgacccttttacctgtttctctgtggccacatgttccacgctgactgtctcctg
caggccgtgaggcctggccttcctgcctacaagcaggccaggcttgaggaactgcagcgc
aagcttggggctgcgcctcctccaaccaaaggctctgcgaaggccaaggaggccgaagca
ggggctgcggctgtggggcccagccgggagcagctcaaggctgacctagatgaactggtg
gctgctgagtgtgtgtactgtggggagctgatgattcgctctattgaccggcctttcatt
gatccccagcgctatgaggaggaacacctcagctggctatag
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integrated database retrieval system
