Apodemus sylvaticus (European woodmouse): 127685793
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Entry
127685793 CDS
T10613
Symbol
Lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asyl03016
]
127685793 (Lcmt2)
Enzymes [BR:
asyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
127685793 (Lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
127685793 (Lcmt2)
Transfer RNA biogenesis [BR:
asyl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
127685793 (Lcmt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_6
Kelch_2
Kelch_1
CecR_C
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
127685793
NCBI-ProteinID:
XP_052039327
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All DBs
Position
5:complement(103753057..103758772)
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AA seq
686 aa
AA seq
DB search
MGPRSRQRRAGTVQSTNDSSSLSKRSLAAHGYVRDAFAALLVPGPVRRTPLIHRGYYVRA
RAVRHCVRAFLEFTGGLPSPTRAQILSLGSGSDSLYFRLKAAGLLARAAVWEVDFPDVSR
LKAKRIEETPELCAQTGPFKIGDSASTLCFESSDYRILGADLRELQRLGEALDSAGLDST
SPTLLLAEAVLTYLEPSSAAALIAWAAQRFPDALFVIYEQMKPSDAFGQIMLQHFRRLHS
PLHGLELFPDVEAQRQRFLQAGWTACSALDLNEFYHRLLPADERQRVETLEPFDEFEEWH
LKCSHYFILAASRGDILSETPVFLPSEASFQIDPASPSGFLSARVVTSDHQHSSLKRYGH
SSVLLSPGIIFSAGGFGEQEGRHCRVSRFHLLSRSCDSEWKGCQLSTLGTEGQWDGRLYH
TMTRLSDTQVLVLGGRLSPVSPAAGALQLDLYKSEDNCPEGQNVRVTKAALEEDPMLSCW
RHSTTEVYYQNQRYLFVYGGRSVAEPVLSDCRFLHVETMAWVKIPVQGTSPEGRHSHSAC
SWQGGALIAGGLGASEEPLSSVLFLRPISSGFLWESIDIQPSITPRYSHTAHVFNGKLLL
VGGVWIHSSSVPGVTVISLTTGLSSEYQIDTTSVPWPLMLHNHSSALLPEERQLLLIGGG
GNCFSFGTYFNPHTVALDLSSLSSGQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcgaagccgccagcgccgggcgggaacggtccagagcaccaacgacagcagc
tccctcagcaagcgatcgctagccgcacacggatacgtgcgcgatgccttcgcggcgttg
ctggtcccggggccggtgcgacgcaccccgcttatccaccgcggctattacgtgcgcgcg
cgcgccgtgcgtcactgcgtgcgcgccttcctcgaattcactggcgggctcccgtccccg
accagggcgcagatcctgtccttgggctcaggctccgactcgctttattttcgtctgaaa
gctgcgggcctcctggcccgagccgccgtctgggaggtggacttcccggacgtgtctcgg
ctcaaagcgaagaggatcgaggagaccccggagctgtgtgcgcagaccggtcctttcaag
atcggggactcagcgtcgacgctgtgctttgagagctcggactaccgcatcctgggcgct
gacctgcgggagctccagcgattaggggaggccctggacagcgctggcctggacagcacc
tctcccacgctgctcctggccgaggcggtgctgacctacctggagccctccagtgctgca
gccctcatcgcctgggctgcccagcgtttccccgacgcccttttcgtgatctatgagcag
atgaagccgagtgatgcctttggtcaaatcatgctgcagcactttcggcggttgcactca
cccctgcatggcctggagctctttccagacgtggaggcccagcgccagcgcttccttcaa
gctggctggactgcctgcagcgccctggacctgaatgagttctatcaccgccttctcccg
gcagatgagcgccagcgggtcgagacacttgagccctttgatgaatttgaggagtggcat
ctgaagtgttcccactatttcatcctggcagcatctagaggagacattctgtcagaaact
ccagtgtttctgccctcagaggcttcttttcagatagatcctgcttcgccttcagggttt
ctttctgccagagtagtcactagtgaccaccagcactcaagcctgaagcgatatggccat
tcctctgtcctcttgagccctggcattattttcagtgcaggaggctttggagaacaagaa
ggacgacactgccgagtgagcaggtttcacttactctcaagatcctgtgactctgagtgg
aaaggctgccaattaagtactttggggactgaaggccagtgggatggccgcctttatcac
accatgacaaggctttcagatactcaagttctggttcttggagggagactatccccagta
agtccagccgctggggctctccaacttgatttatacaaaagtgaggataattgtcctgag
ggtcagaatgtaagggtaacaaaggctgccttggaagaagatcccatgttgtcatgttgg
cgacattcaacaacggaagtatactatcagaatcaaagatacttatttgtgtatggtggc
cgaagtgtggcggaacccgtactaagcgactgtcgttttctacatgtagagacaatggct
tgggtcaaaatcccagtccaaggcacatcacctgaaggtcggcattcccatagtgcctgc
agttggcaagggggagcacttatcgctggaggtcttggggcttctgaggaaccgttgagc
tctgtactctttctcagacccatatcctctggcttcctctgggaatcaatagacatccag
ccctccattaccccaagatactctcacacggcgcatgtatttaatggaaagctgcttctg
gttggaggggtctggattcattcctcctcagttcctggagtgacggttatcagtttgacc
acaggattgagctctgagtatcagatcgacacaacgtctgtgccatggcctttaatgttg
cataaccacagcagtgcccttcttcctgaggagaggcagctcctgcttattggaggtgga
gggaactgtttttcctttggtacttatttcaacccccacacagtggcattagatctttct
tccttaagttcagggcaataa
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