Apodemus sylvaticus (European woodmouse): 127685879
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Entry
127685879 CDS
T10613
Symbol
Nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127685879 (Nphp1)
Cilium and associated proteins [BR:
asyl03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
127685879 (Nphp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
SH3_3
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
127685879
NCBI-ProteinID:
XP_052039511
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All DBs
Position
5:complement(110543679..110594513)
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AA seq
695 aa
AA seq
DB search
MLARRPRDPLQALRRRGQELKLQVDSLVTESQLTGALEPSKRRDIYQRCIQLKQAVDENK
NALQKLNKAGEAAPVGNYEQRKEEEHTLLEKLACQLQELAVGISRKDALKVEAHSDKEED
DTTEDDDEEETEETGGEEEESEGDEEGKQEQASPKQAETVTYIALGDFAAQQSGDLTFKK
GDILHIIEKKPDGWWLAKDAGGAEGLIPRTYLEPYNKEDKLESSEGSEEGGEEDGEDAED
AEEDVEVVDETADGAQVKQRTDSHWSAVRKAISEQINTVDVLTTMGAIPAGFRPSTLSQL
LDDAGNQFRASYFLQPELTTSQLAFRDLTWDAKAGTIMSRPSRVSLILTLWSCKMIPLPG
TSVQVLSRHIRLCLFDGSKVLSNIHTVRAVWQPKKPKTWSFSPQVTGILPCLLDGDCFIR
SNSSTPDLGILFELGISYIRNSTGERGELSCGWVFLKLFDATGVPIPAKTYELFLNGGTP
YEKGVEVDPSVSRRAQGSVFRQMISVRRQPQLLVKLRSLNRRSRAMLSLLPETLVGSMCS
AHLLIFYRQILGDVLLRDRTSLQSADLISHPVLATFPLLLEQPDVMDALRSSWAEKESTL
KRSEKRDKELLKAEFLLVYHDCVLPLLHSTLLPPFRWAEEETEAARWRAIADFLKQSRES
EGSLKALLAPDGVHKPFDLSEQTYDFLGEIRKNSG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccggcggccgcgggacccgctgcaggcgctgaggcgccgcgggcaggagctg
aagctgcaggttgatagtttggttactgaaagccaactaacaggtgctctggaaccaagt
aaaaggagagatatttaccaaagatgtatccagttaaaacaggcagtagatgaaaataaa
aacgctcttcaaaaattaaacaaagctggtgaagctgcacctgtggggaactatgagcag
aggaaggaggaggagcacactcttctggagaagctagcctgccagctgcaggagcttgct
gtgggcatcagcaggaaagacgctctcaaagttgaggcacacagtgacaaggaggaagac
gacacaactgaggatgacgacgaagaagaaactgaagaaactggcggagaggaagaagag
tcagaaggggatgaggaaggaaagcaggaacaggcctccccgaaacaagcagaaacggtc
acgtacattgctctgggggacttcgctgctcagcagtcgggggacctgacatttaagaaa
ggggacattctccatataattgagaagaagcctgacggttggtggctggctaaggacgct
ggaggagctgagggtctcattcccaggacctacttggagccctataataaagaagacaag
ctggaatcaagcgaaggcagcgaggagggcggcgaggaggatggtgaggacgctgaggac
gctgaggaggacgtggaagtggtggatgaaactgcagatggagcccaggtgaaacagaga
actgattcccactggagtgctgttcgaaaagctatctcagagcagataaacaccgttgat
gtgttaaccacaatgggagccatccctgcagggttccggccttccaccctgtcccagctg
ctggatgacgcagggaaccaatttcgagcaagctacttcttgcagccagagctcacaaca
tcgcagctcgccttcagagatctaacatgggatgctaaggcaggcacgatcatgtcgaga
ccaagtcgtgtttcattgattctgaccctatggagctgtaaaatgattcctctcccagga
acaagcgtgcaggtcctcagtagacacatccgcctctgcctgtttgatggtagcaaggtc
ctgagtaatattcacacagttcgagcggtgtggcagcctaaaaagccaaaaacgtggagc
ttttctcctcaggtcactggcatcttgccatgcttgctggatggtgactgttttatcagg
tccaattcttcaactccagacctcgggatattatttgaacttggaatttcttacattcgt
aattcgactggtgagaggggagagttaagctgtggctgggtgtttcttaagcttttcgat
gccaccggagttcctattccagccaaaacatacgaacttttcttgaatggaggcactcct
tatgaaaaaggtgttgaagtggacccttcagtgtccagaagagcacagggcagtgttttc
cgtcagatgataagcgtgcggaggcagcctcaacttctggtgaaacttcggtctctgaac
aggaggtcaagggccatgctcagtctgctgccagaaaccctggtggggagcatgtgctct
gctcatttactgatattttaccgacaaattcttggagatgtgctcctgagagacaggaca
agcctgcaaagtgctgatttaatcagtcatcctgtgctggccaccttccctctgctcctg
gagcagcctgacgtgatggatgccctcaggagttcctgggctgagaaagaaagcacacta
aagcgatcggagaagagagacaaagagctcctgaaggctgagttcctcctggtctaccat
gactgcgtgctcccccttctgcactctacactgctgcccccctttaggtgggcggaggaa
gagacagaggctgcgagatggagagccatcgctgacttcctcaagcagagccgagagagt
gagggctccctgaaggctctgctggcaccagatggagtccacaaaccatttgacctttcg
gagcagacctatgacttcttgggtgaaataagaaagaactcaggctga
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