Apodemus sylvaticus (European woodmouse): 127685970
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Entry
127685970 CDS
T10613
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04110
Cell cycle
asyl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127685970 (Smc3)
04114 Oocyte meiosis
127685970 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127685970 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
asyl00535
]
127685970 (Smc3)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
127685970 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
127685970 (Smc3)
Proteoglycans [BR:
asyl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
127685970 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
127685970
NCBI-ProteinID:
XP_052039693
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All DBs
Position
1:complement(7704812..7744730)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgattatccagggtttccgaagttaccgagatcaaacgattgta
gatcccttcagttcaaaacataatgttattgtgggcagaaatggatctggaaaaagcaac
tttttttatgcaatccagtttgttctcagtgatgaatttagtcatcttcgtccagagcag
cgattggctttgttgcatgagggtacaggtcctcgtgttatttctgcttttgtggaaatc
atttttgacaattcagacaaccgattaccgattgataaagaggaagtttcgcttcgaaga
gttattggtgccaaaaaagatcagtatttcctagataagaagatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctgggttttcgagaagtaatccttattacattgttaaa
caaggaaagatcaaccaaatggcaacagcaccagattctcagagattaaaactgttgaga
gaagtagctggtaccagagtgtatgacgaacgtaaagaagaaagcatctccctgatgaaa
gaaacagagggcaaacgggaaaagatcaatgaattgttaaaatacattgaagagcgatta
catactctagaggaggaaaaggaggaactggcccagtatcagaagtgggataaaatgagg
cgtgccctggagtacaccatctacaaccaggagctcaacgagactcgcgcgaagctggat
gagctttctgctaagcgagaaacaagtggagagaaatccagacaattaagagacgcccag
caggatgcaagagataaaatggaggatattgagcgccaggttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaagaacagcttagtgctgaaagacaagagcagattaag
caaaggactaagttggaacttaaagccaaggatttacaagacgagctggcgggcaacagt
gaacagcggaaacgtttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggctgaaacagaacctaaattcaacagcgtcaaagaaaaagaagagcga
ggaattgctagattggctcaagctacacaggaaagaactgatctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactgaag
tctttagatcaggctatcaatgataagaaaagacagattgctgctatacacaaggatttg
gaggataccgaggcaaataaagagaaaaatctggagcaatataataaactggatcaggat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatattatgaagtaaaaaat
aagaaagatgaactacaaagtgaaagaaattacctgtggagagaggagaatgcagagcag
caagcactggctgctaaaagagaagaccttgagaagaagcagcagcttctcagagcggcc
acaggaaaggccattttaaatggaatagatagcattaataaagtactagaacattttcgg
cgaaaaggtataaaccaacatgttcagaatggctaccatggcatcgtaatgaataacttt
gagtgtgaaccagctttctatacctgtgtggaagtcactgctggtaacaggttattttat
cacattgttgattcagatgaagtcagcacgaaaattttaatggagttcaataaaatgaat
cttcctggagaggtgactttcctgcctcttaacaaattagatgtgagggacactgcctat
cctgaaactaacgatgctattcctatgatcagtaagctgaggtacaatcccaggtttgac
aaagctttcaaacatgtgtttggaaagaccctcatctgtcggagcatggaggtttcaact
cagctggctcgtgccttcactatggactgcattactttggaaggtgatcaagtcagtcat
agaggtgctctgactggaggctattacgacacaagaaaatctcgacttgagttacagaaa
gacgttagaaaagcagaagaggaactgggtgagcttgaggcaaagctcaatgaaaaccta
cgcagaaacattgaaaggattaataatgaaattgatcaattgatgaaccaaatgcagcag
atagagacccaacaaagaaaatttaaagcatccagagatagcatattgtcagagatgaag
atgctaaaagagaagagacagcagtcagaaaagaccttcatgccaaagcaacgtagctta
caaagcttggaggcaagtctgcatgctatggagtccaccagagagtcactgaaagcagaa
ctagggacggatttgctttctcaactcagtctagaagatcagaagagagtcgatgcacta
aatgatgagatccgtcaacttcagcaggaaaacagacagctgctaaatgaaagaattaaa
ctagaaggtattattactcgagtagagacttacctgaatgagaatctgaggaaacgcttg
gaccaagtagaacaggaacttaatgaactgagagagacagaaggtggtactgttcttact
gccacaacatcagaacttgaagctattaataaaagagtaaaagatactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagctccagaaaagt
atggagcgctggaaaaatatggagaaagaacacatggatgccataaatcatgacactaaa
gaactggagaagatgaccaaccgacagggcatgctgctgaagaagaaggaagagtgtatg
aagaagattcgggagctggggtcccttccccaggaagcgtttgagaagtaccagacactg
agccttaagcagttgtttcgaaaactcgagcagtgcaacaccgagttaaagaagtacagc
catgtgaacaagaaggctctagatcagttcgtgaacttctctgagcagaaagaaaagctg
atcaagcgacaagaggagttggataggggctacaaatcaatcatggagttaatgaatgta
ctcgaacttcggaaatatgaagctattcagttaactttcaaacaggtatctaagaacttc
agtgaagttttccagaagttggtacctggtggcaaagcgactttggtgatgaagaaagga
gatgtggagggcagccagtctcaggacgaaggagaggggagcggcgagagcgagaggggc
tctggctcacagagcagtgttccatcagttgaccagttcacaggagtcgggatcagggtg
tcctttacagggaagcaaggggagatgagagagatgcagcagctttccggaggacagaaa
tctctggtggcccttgctctcatttttgccattcagaaatgtgaccctgctcctttttac
ctgtttgatgagattgaccaagctttggatgcgcagcataggaaagctgtgtcagatatg
attatggagctagctgtacatgcccagtttattactaccacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcacattgatgtg
atcacagcagagatggccaaagattttgtagaagatgataccacacatggttaa
DBGET
integrated database retrieval system
