Apodemus sylvaticus (European woodmouse): 127686094
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Entry
127686094 CDS
T10613
Symbol
Cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127686094 (Cfap43)
Cilium and associated proteins [BR:
asyl03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
127686094 (Cfap43)
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_HPS5
CFAP43_N
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
127686094
NCBI-ProteinID:
XP_052039924
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All DBs
Position
1:13818692..13907716
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AA seq
1685 aa
AA seq
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MSQGRERDEVTTTTSATATATASATATASASAHYSGASLSVRWVQGFPSQNVHFVNDQTI
CYPSGNYVIFINLETKKKTVLQCINGIVGVVATNVPGEVVAFSDRRLKPVIYIYSFPSLT
RRTKLKGDILLDYTLLCFSYCGTYLASYSSLPEFELALWNWEANIILCKKSNPGMDVSQM
SFNPMNWHQMCLSSSSAVSVWTIERSNQEHHFRIRLVKLPLEDGSVLNETDVLFPTSLQK
DLIYGPVLPLSAIAGLVGEEAETFRPKDDIYPLLHPTMHCWTPSSDLYVGCEEGHLLMIN
TETLKVTVLQKAEDFPVPDGGQLINPLTLAYQKDGILASGIDGVIYSFIIKETKYQVKTF
LEFDGPVTHLVFSPSYKMLLIQTDKGSVYIYTFGAESPLDKLLDACDGKVQAVSFISPGT
KHFLTLTSSGEVSVLSIEDCNCTGRIFLKTQATSLACCPSSPSAAVGTVDGHVYFLNTMD
VESPQVIHKAFLSQSPVKIVTYDQRGIFLLVGTEEGNIFVIDSRPSKSFQIFGYTETGKD
ILQISTVSVVESDVVEVLVLSPLPEMGRSRMEYFTLPAMLPQVVPENFSDERGRLKDDFT
HKYLYEVEHTLSSAVLGFAGSKIYGFCSQVPYICSYTMPVKEHTGICVLKPSQKMQSKQY
GAGRVYMSSHGLWLMTIAKCGILCIRDMFTLETFVRCRSHSHQGRGIQNMKMSMDGQHIL
VNGKDDNTLVYLRWKRLGANIASEIFEHCHQLVLNLSKTMEIESEYLVSPGDSQNAQEDD
AADSQIKMSSDSSEEEADIDHKTIPWIQQKMEEAIKKEVRIFSPRRKEIKRGIKELAKII
AVMMEENEKVDVIAKLEEQEFCLDADELERLHDECEEELSKIRKDVEMHNLAKSYLTELI
KEECWNSMAVKGRALKCFHIPYVVDNFPMKERTEEELQELNKVKQQKKIEIECLKLRKEI
VEAQSAATLVKKHHEEEDEEEEDEEKVVKSTSLPNYLLGSLSTDFGADTSLLTSQLELHS
REEKINQIVLLKDIIYNIKKTFNSEFEAAYKQKEIEIARVKEKNVRIAEIISDLELEETV
WQPVFEDNEKPERALVVEDDEISFKKYIAPWQKSKSEFVTPYDLERLQQARISDARQRGL
MDMMGGVLEVKKEDILRMVIPQPAFMAKADALWSEDERKQFKEYEKKVKELNEERDKYRK
SLEAELKKLQNSIQESTQNFDEHLKRLFERRVKAEMVINQEELKINNIVFSLLLDEELSS
REQFLNNYLSKKQEEKTKTSEAIQKAREDLDVFKEHHDNLVAEDKILDRSFKKEFSDISG
HYVDVLYKLFKRRPRVHKQKTQTDVTSLVPYGDRPGSAKLNRENFAQLMKSMDELDNINN
MPEGLDPSVWEHFCTARRAKVENEYKVKQKAACLLEMTTFLRKRMEDDDAVQHEIERVFH
ELVRLQEEKVRFQVNLTVQILLKQGQVELENFQLILEYSDAILINKNIIEDLNSVIRTQG
QKKVASMIESKEVHKGIYQIEWEHKKMEMEMEDLNQKAWDIQMLFFSRDRQKYLNEPNYE
NVVAIQIGIMEQTIGVIDKNHKKNVENCKKLLKKLGKYSNQKDVANYTLSCNLREELVAV
SERQDICNVIGSKLTCEKIAKERYDNLMKQQKLTNISKQQAEQISILQAEVERLRMKTFP
ALVPM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaggccgggagcgcgacgaagtcactaccactacctctgccactgccactgcc
actgcctctgccactgccactgcctctgcctccgcccactactccggagcctccctgtcg
gtgagatgggtgcaaggattccctagtcagaacgtccattttgtcaatgaccaaaccatc
tgctacccttctgggaactatgtaatattcattaacctcgaaaccaagaagaagactgta
ctccagtgtatcaatgggattgtgggcgtcgtggcaactaacgttcctggtgaagttgtg
gcgttctctgaccgcagacttaaacctgtcatctacatatacagctttccttcactgacc
agaagaaccaagttaaaaggggacatcctcctggactacactctactttgcttcagttac
tgtggcacctacctggccagttattcatctctcccagagtttgagctggctctctggaac
tgggaagccaatatcatcttgtgcaaaaaatcgaatcctggaatggatgtaagccagatg
tccttcaaccccatgaactggcaccaaatgtgtctgtcgagttccagtgccgtgagcgtg
tggaccatcgaaagaagcaaccaggagcatcatttcaggataaggttggtaaagctgccc
ctagaagacgggtcggtcttaaacgaaaccgatgtgcttttccccacctctctgcaaaag
gatctcatttatgggcctgtattgccactgtcagccattgctgggctggtgggcgaagag
gcagagacattcaggccaaaagatgacatataccctctgcttcacccaactatgcactgc
tggactccctcaagcgacctgtacgttgggtgtgaagagggccatcttctgatgattaac
acagagaccttgaaagtgaccgtgctccagaaggcggaagactttccagtaccggatgga
ggccagcttatcaacccgctcacactggcgtaccaaaaggacggcatcctcgcttctgga
attgatggtgtgatatactcgttcatcatcaaagaaacaaagtaccaagtgaagacattt
cttgagtttgatgggccagtgacacatctggtgttctcccctagttacaaaatgttgctg
attcaaacagacaaggggtctgtttatatctacacatttggtgcagagtcgcctctggat
aaactcctcgatgcctgtgatgggaaagtccaggccgtcagctttatctcacctggaacc
aaacacttcctgacgctcacaagctccggggaagtttccgttttatcaatagaagactgc
aattgtacaggcaggattttcctgaagactcaagcaacatctctggcatgctgcccgtct
tccccgtcagctgccgtggggacggtggatggccacgtgtacttcctgaacaccatggat
gtggagtcccctcaggtgatccacaaggccttcctctcccaatcaccggtgaagatagtg
acttacgaccagcgaggaatctttctgctagtcggtacagaagaaggaaacatctttgtc
attgattccagaccctcaaaatcatttcagatttttggatacactgagacgggcaaggac
atcctgcagatatccacggtgtctgtcgtggaatcagacgtggtcgaagtgctggtattg
tccccgcttccagaaatgggaagaagcaggatggagtactttaccttgcctgccatgtta
ccacaagtggttcctgaaaacttttctgatgaaagaggaaggttgaaagacgacttcacc
cacaagtacctgtatgaggtggaacacactctgtcctctgccgtgctgggctttgcaggc
agcaaaatctacggcttctgcagccaggtgccgtacatctgcagctatacgatgcctgtg
aaggagcacactggcatctgcgtcctcaagccaagccagaaaatgcagagcaaacagtac
ggagccgggagggtctacatgtcttcccacggactatggcttatgacaatagccaagtgt
gggattctctgcattcgagatatgttcactctggaaacctttgttcgatgtcggagtcat
tctcaccaggggcgggggatccagaacatgaaaatgtcaatggacggacagcacatcctg
gtgaatggaaaagatgacaacacccttgtctacctcagatggaagcggcttggagcaaac
atagcaagtgagatctttgagcactgtcatcagctggtactcaatctgtccaagaccatg
gaaatagagagtgaatacttagtgtcgccaggagattcccagaacgcacaagaagatgac
gcagccgattcccaaataaagatgagctctgactcatcagaagaggaggcagacattgat
cataagacgattccctggatccaacaaaaaatggaagaggccatcaaaaaggaggtgagg
attttttcccctagaagaaaggagatcaaaagaggaattaaggagcttgctaaaattatt
gccgtgatgatggaggaaaacgaaaaggtggacgtcatcgcaaaactggaggagcaggag
ttttgcctggacgccgatgagctggaaaggcttcacgatgaatgcgaggaggagttatcg
aagataagaaaggatgtggagatgcacaacctagccaagagctacttaactgagctcatc
aaggaggagtgctggaactccatggctgtgaagggccgggctctaaagtgttttcacata
ccctatgtggttgacaacttccccatgaaggagcgcacagaagaggagctgcaggagttg
aataaagttaagcagcaaaagaagattgagatagagtgtcttaagctccggaaggaaatt
gttgaggcccagtctgcagccactttggttaaaaagcatcatgaagaggaggatgaggaa
gaagaggatgaggaaaaggtagtaaaaagtaccagtctgcccaattacctgcttggtagc
ttgagcactgattttggggcagacacatctttgttgacaagccaattggaacttcattcc
agagaggagaaaatcaaccaaattgtattgctaaaagatatcatttacaatataaaaaag
actttcaatagtgaatttgaagctgcctataagcaaaaagagattgaaattgcacgtgta
aaagaaaagaatgttagaattgcagaaattatttcagacctggaattggaagaaacagtc
tggcaaccagtgtttgaagacaatgagaaaccagaaagagcccttgttgtggaagatgat
gagatttcatttaaaaaatacattgctccatggcaaaaatccaaatcagaatttgtcaca
ccctatgatttggagcgattgcagcaagcacggatctctgatgcaagacagagaggcctg
atggacatgatgggaggcgttctggaagtcaagaaggaagacatcttaaggatggtgatc
cctcagccggcgttcatggccaaagctgatgctctgtggagtgaagatgaaaggaagcaa
ttcaaggagtacgagaaaaaggtcaaggagctaaacgaagagagagacaagtatagaaag
tctttagaagcagaactgaagaaactacaaaattctattcaagagagcacacagaacttt
gatgagcatctgaagagactctttgaaaggagggtgaaggcagagatggtcatcaaccag
gaggaactgaaaataaacaacattgtgttttctttgctgctggatgaagaactcagctcc
agggaacagttcctgaacaactacctttcaaagaagcaggaggagaaaaccaagacttcc
gaagccatccagaaagcaagagaagatctggacgtgttcaaggagcaccatgacaacttg
gtggcggaagacaaaattctggatcgaagcttcaaaaaggaattttctgacatttctggt
cactatgtggacgtcctctacaaactttttaaacgccggccaagggttcacaaacagaaa
acgcagacagatgtgaccagtcttgttccttatggagatcgaccaggatctgccaagtta
aatagggaaaactttgcccagctaatgaaatccatggacgagttggacaatatcaataac
atgccagaaggcttggacccttcagtctgggaacatttctgcacagctagacgagcaaaa
gtggaaaacgaatacaaagtgaagcagaaggcagcctgcctcctggaaatgacgactttt
ctccggaagcgaatggaagatgacgacgccgtgcaacatgagatcgagagggtgttccat
gagcttgtccgattacaggaagaaaaagtgagattccaggtgaatttgacagtgcaaatt
cttcttaaacaaggacaagtagaactggagaatttccagttgattctggaatattctgat
gcaattctcatcaataagaatataattgaagacttgaattccgtaattcggactcagggt
caaaagaaagttgctagcatgatagaaagtaaagaggtccacaaaggaatatatcagatt
gagtgggagcacaagaaaatggagatggagatggaggacctaaaccagaaggcctgggac
atccagatgctattcttctcacgagatcggcagaagtacctaaatgaaccaaactatgag
aatgtggtcgccattcagattggcataatggagcaaacgattggtgttatagataagaat
cataagaagaatgtagaaaactgcaaaaaactactaaagaaattgggaaaatacagcaat
cagaaagatgtagcaaattacaccctaagctgtaatctacgggaagaactggtggctgtc
tcagagagacaagacatttgcaatgtaatagggtctaagctgacctgtgagaagattgcc
aaagaacgctatgacaacctgatgaagcagcagaagctgacgaacatctccaagcagcaa
gctgagcagatttcaatactgcaggctgaagttgagagactgaggatgaaaacattccct
gctcttgtcccaatgtag
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