Apodemus sylvaticus (European woodmouse): 127686147
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Entry
127686147 CDS
T10613
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asyl03041
]
127686147 (Rbm39)
Spliceosome [BR:
asyl03041
]
Common components
Common spliceosomal components
General mRNP proteins
127686147 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
127686147
NCBI-ProteinID:
XP_052040043
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All DBs
Position
5:complement(141630786..141663148)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgaacagtgccaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagagaaaaaggagcaaaagcaaagaacggaagcgaagtcgagat
agagaaaggaaaaagagcaaaagccgagagcggaaacgaagtagaagcaaagaaaggaga
cggagccgctcccgaagtcgggatagaagatttcgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccattcaggaaagacaagagtcctgtgagggaa
cctattgataatctgactcctgaggaaagggatgcaaggacagttttctgcatgcaactg
gcagcaagaattcgaccaagagatttggaagaatttttctctacagtaggaaaggttcga
gatgtgagaatgatttccgatagaaattcaagacgttccaaaggaattgcctacgtggaa
tttgttgatgtcagttcagtgcctctagcaattggattaactggtcaacgagttttagga
gtaccaatcatagtccaggcatcccaggcagaaaaaaacagagctgctgcaatggcaaac
aatttacaaaagggaagtgctggacccatgaggctctacgtgggctcattacactttaac
ataactgaagatatgcttcgggggatctttgaaccttttgggaggattgaaagtattcag
ctcatgatggatagtgaaactggtcggtctaagggatatggatttattacattttctgat
tcagaatgtgccaagaaggctttggaacagctcaatggatttgagttagctggaagacca
atgaaagttggccatgttactgaacgaactgatgcttctagtgctagttcatttttggac
agtgatgaactagaaaggactggaattgacttgggaacaactggacgtcttcagttaatg
gcaagacttgcggagggtactggtttgcagattccacctgcagcacaacaagctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagactgaagcctcagctttagctgcagctgcatctgttcaacct
cttgcaacacagtgtttccaactatctaacatgtttaatcctcaaacagaagaagaggtt
ggatgggatacagagattaaagatgatgtcattgaagaatgtaataaacatggaggagtc
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatct
attgcagcagctattgctgctgtcaatgcattgcatggtcggtggtttgcaggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtaggcggtga
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