Apodemus sylvaticus (European woodmouse): 127686164
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Entry
127686164 CDS
T10613
Symbol
Soga1
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
127686164 (Soga1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127686164
NCBI-ProteinID:
XP_052040078
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Position
5:complement(142471822..142540290)
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AA seq
1655 aa
AA seq
DB search
MEAPAGESAARGYGPPPVPAPTAERKKSHRAPSPARPKDVAGWSLAKGRRSTGPGAATAC
GAASSARPDKKGRAVAPGARGAGPRVAGVRTGVRAKGRPRPGTGPRPPPPPPSLTDSSSE
VSDCASEEARLLGLELALSSDAESAAGGPAGTRTGQPPQPAPSGQQPPRPPASPDEPSVA
ASSVGSSRLPLSASLAFSDLTEEMLDCGPGGLVRELEELRSENDYLKDEIEELRAEMLEM
RDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRGLEQD
VKVSKDISMRLHKELEVVEKKRMRLEEENEGLRQRLIETELAKQVLQTELDRPREHSLKK
RGTRSLGKTEKKPTTQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYRSL
YGDLDAALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMK
DHGGGGGPEARLAFSSLGGECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLLNEL
AKYRSEHELDVTLSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSNLQRC
DLASCQSTRPMLETDAEAGDSAQCVPAPLGETLEPHASRLCRAREAEALPGLREQAALVS
KAIDVLVADANGFSVGLRLCLDNECADLRLHEAPDNSEGPRDAKLIRAILVRLSVLQQEL
NAFTRKADVALGSSGKEQPEPFPALPALGSQGPAKEIMLSKDLGSDFQPPDFRDLLEWEP
RIREAFRAGDLESKPDPSRNFRPYRAEDNDSYASEIKELQLVLAEAHDSLRGLQEQLSQE
RQLRKEEADSFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNILVQESQQ
FKHNFLLLFMKLRWFLKRWRQGKALPSEEDDFLEVNSMKELYLLMEEEEMNAQHSDNKAC
TGDSWTQNTPNEYIKTLADMKVTLKELCWLLRDERRGLTELQQQFAKAKATWETERAELR
SHASQMELKAGKGASERPGPDWKAALQREREEQQHLLAESYSAVMELTRQLQMSERHWSQ
EKLQLVERLQGEKQQVEQQVKELQNRLSQLQKAAEPWVLKHSDLEKQDNSWKETRSEKTH
DKEGVSEAELGGTGLKRTKSVSSMSEFESLLDCSPYLAGGDARNKKLPNSPAFAFVGTEP
VEAEKGAKEKPGLSTRDCSHIGSLSCPEPAGRQMQRSYTAPDKTGIRVYYSPPVARRLGV
PVVHDKEGKILIEPGFLFTTAKPKESAEADGLAESAYGRWLCNFSRQRLDGGSGSSTSGS
GAAFPAALHDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKSTSSQTVGLATVGTQTIR
TVSVGLQTDPPRSSLHSKSWSPRSSSLMSVRSKQISSSLDKVHSRIERPCCSPKYGSPKL
QRRSVSKLDSTKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSVVEHSGS
TESVWKLGMSEARTKPEPPKYGIVQEFFRNVCGRAPSPTTAAGEESSKKPEPLSPASYHQ
SEGVARILNKKAAKAGGSKEIRPTMLSQVGKDGVLRDGDGSLILPSEEAVCDCSAQSLAS
CFIRPSRNTIRHSPSKCRLHPSESGWGGEERAAPQ
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccagcgggagagtcagcggcgcggggctacggccccccgcctgtgcccgcg
cccaccgcggagaggaagaagagccaccgcgcgccatcgccagcccggcccaaggacgtg
gccggctggtctctagccaaaggccgccgcagcacaggcccgggggccgctacagcctgt
ggcgccgcgtcctcggcgaggcccgacaagaagggacgcgcggtggctcctggcgcccga
ggcgcggggccgcgggtggccggggtgcgcacgggggtccgcgccaagggccgccctcgt
ccgggtaccgggccccgcccgccaccgccgccgcccagcctcacggacagcagctccgag
gtgtcggactgcgcgtcggaggaggcgcgcctgctgggcctggagctggcgctgagcagc
gacgccgagtctgcggcgggcggcccggcggggacccgtacggggcagccgccccagcca
gcgccgtcggggcagcagcctccgcggccgcccgcctccccggatgagccgtcggtggcc
gcatcgtcggtgggcagcagccgcttgccactcagcgcctcgttagccttctccgacctc
accgaggagatgctggactgtgggcccggaggcttggtgcgggagctggaagagctgcgt
tccgagaacgactatcttaaggatgagattgaggagctccgggctgagatgctggagatg
cgggatgtctacatggaggaagacgtgtaccagctgcaggagttgcggcagcagctggac
caagccagcaagacctgccgcatcctgcagtaccggctgcgtaaggccgagcgccgcagc
ctccgcgccgcccagacagggcaggttgatggggaactcatccgcggtctggaacaggac
gtcaaggtctctaaggacatctccatgcggcttcacaaggagctggaggtggtggagaag
aagcggatgaggctggaggaggagaacgagggccttcggcagaggctcatcgagacagag
ctggccaagcaggtgctacagacggagctggatcgccccagagagcattccttgaagaaa
agaggaacccgatctctggggaagacagaaaagaagcctaccacacaggaggacagtgca
gacctcaagtgccagctgcattttgcaaaggaggagtcggccctcatgtgcaagaagctc
accaagttggctaaggagaacgacagcatgaaggaggaactgctcaagtaccggtctctc
tacggggacctggacgcagccctgtctgcagaggagctggcggacgctccgcactcgcgg
gagactgagctgaaggtgcacctgaagctggtggaggaggaggccaacctgctgagccgg
cgcatcgtggagctggaggtggagaaccggggcctgcgggccgagatggacgacatgaag
gaccacggaggtggcgggggtcccgaggccaggctggccttctcttctctcggtggcgag
tgtggggagagcctagccgagctgcggcgacatctgcagttcgtggaagaggaggctgag
ctgctgcggcgctcctcggccgagttggaggaccagaacaagttgctgttgaacgagctg
gccaaataccgctcggagcacgagctggacgtgactctgtcggaggacagctgctcggtg
ctcagcgagccctcgcaggaggagctggcggccgccaagctgcagatcggcgagctgagc
ggcaaggtcaagaaacttcagtacgagaaccgcgtgctcctctccaacctgcagcgctgt
gacctggcctcctgccagagcacgcgccccatgctggagacggacgctgaggctggggac
tccgcgcagtgcgtgcctgcccctctgggcgagacgctggagcctcacgcctcccggctt
tgcagggcccgtgaggctgaggcgctgccgggcctacgggagcaggccgctttggtcagc
aaggccatcgacgtcctggtggctgatgccaatggcttctcagtcggcctccgcctgtgc
ctggacaatgagtgtgctgacttgcgattgcacgaggcgccggacaacagcgagggcccc
agggatgccaagctcatccgtgccatcctggtgcgcctgagtgtgttgcaacaggagctg
aacgccttcacccgcaaggcagatgtggccttggggagctccggcaaggagcagcccgag
cccttccctgctctgcctgccttgggctcccaggggcctgctaaggagatcatgctgtcc
aaagaccttggctctgacttccagccacctgacttcagagacctgctggagtgggagcct
aggatccgagaggccttccgcgccggtgacctggagtccaagcctgaccctagtcggaac
ttcaggccttaccgagctgaagataatgattcctatgcctctgagatcaaggagcttcag
ctggtcctggccgaggcccacgacagcctccggggcttgcaagagcagctgtcccaggag
cggcagctccggaaggaggaggctgacagcttcaaccagaaaatggtccagctgaaggaa
gaccagcagagggcgctgctgaggcgagagtttgagctgcagagtctgagcctccagcgg
cggctggagcagaagttctggagtcaagagaagaacatactggtgcaggagtcccagcag
ttcaagcacaacttcctgctgctcttcatgaagctccggtggttcctgaagcgctggcgg
cagggcaaggctctgcctagcgaggaggatgacttcctggaggtgaacagcatgaaggaa
ctgtacctgctgatggaggaggaggagatgaacgcccagcactcggataacaaggcctgc
acaggggacagctggacccagaacacgcctaatgaatacatcaagaccctggccgacatg
aaggtcaccctgaaggagctgtgttggctgctccgggatgagcgtcggggtctgactgaa
cttcagcagcagttcgctaaggccaaggccacctgggagacagagcgggcggagctcagg
agccacgcctcgcagatggagctgaaggctgggaagggtgccagcgagaggcccgggccc
gactggaaggctgcactgcagcgagagcgggaagagcagcaacacctcctggcagagtcc
tacagcgccgtcatggagctgacgaggcagctgcagatgagcgagcgccactggagccag
gagaagctgcagctggtggagcggctgcagggagaaaagcagcaggtggagcagcaggtg
aaggagctgcagaaccgcctcagtcagctgcagaaggctgccgagccctgggtcctgaag
cactcggacctggagaagcaagacaacagctggaaagagacacgaagtgagaagacccac
gacaaggagggggtttctgaagctgagcttgggggaaccggcttaaagaggaccaaatca
gtctcctccatgtctgagtttgaaagtttgctcgactgctccccctaccttgctggtgga
gatgcccggaacaagaagctgcccaacagccctgcttttgccttcgtgggtactgagccg
gtggaggctgagaaaggtgccaaggagaagcccgggctttccacccgggactgtagccac
attggtagcctgtcctgtccggagcctgcggggagacagatgcagcgcagctacactgct
ccagacaagacgggaatacgagtctactacagtccccccgtggcccggcgcctgggtgtc
cccgtggtccatgacaaggaaggcaagatcctcatcgagccgggcttcctcttcaccaca
gccaagcccaaggagtccgcggaagctgacgggctggccgagagcgcctatggccggtgg
ctttgcaatttttcccggcagcggctggacgggggatctgggtccagcacctcgggttcc
ggagccgctttccccgcagccttgcatgactttgagatgtcgggcaacatgagtgacgac
atgaaggagatcaccaactgcgtgcggcaggccatgcgctccggctccctggagaggaag
gtgaagagcacatccagccagacggtaggtctggccaccgtgggcacccagaccattcgg
acggtcagtgttggcctgcagaccgacccaccccgcagcagcctccacagcaagagctgg
tcaccccgcagctcctcactcatgtctgtgcgcagcaagcagatctcttcctccctggac
aaggtccattcccgcattgagcggccatgttgctcgccgaaatatggctcacccaagctc
cagaggcggtcagtgtccaagctggacagcaccaaggaccgcagcctgtggaacctgcac
cagggcaagcagaatggctcggcctgggctcgctctaccaccacaagggatagcccagta
ctgaggaacatcaatgatgggctgtccagcctcttcagtgtggtggagcactcagggagc
acggagtctgtgtggaaactgggcatgtctgaggcccgaaccaagcctgagcctcccaag
tatggcattgttcaggagttcttccggaatgtgtgtggccgggcaccgagccccaccact
gcagcaggcgaggagagctccaagaagccagagccgctttctccagccagctaccatcaa
tccgagggtgtagccaggatcctgaataagaaggcagctaaggcaggcggtagcaaagaa
atccggcccaccatgctgtcccaggtggggaaggacggtgtccttcgggatggagatgga
tccctgatccttcccagtgaggaagctgtctgtgactgtagcgcccagtcacttgcctct
tgcttcatccggccatcccgcaacaccatccggcactctccttccaagtgcaggctgcac
ccctcagagtcaggctggggcggggaggagagggcagctccccagtga
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integrated database retrieval system
