Apodemus sylvaticus (European woodmouse): 127686170
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Entry
127686170 CDS
T10613
Symbol
Samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03250
Viral life cycle - HIV-1
asyl04623
Cytosolic DNA-sensing pathway
asyl05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127686170 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
127686170 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127686170 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127686170 (Samhd1)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127686170 (Samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
SAM_Ste50p
PDEase_I
Motif
Other DBs
NCBI-GeneID:
127686170
NCBI-ProteinID:
XP_052040090
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All DBs
Position
5:complement(142560221..142594202)
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AA seq
633 aa
AA seq
DB search
MQRPEPEQPAKRPRCDGSPRTPQSTPPAAANQSADPDSQSSDLRTWDPEDVCSFLEKCGF
QEKKVLDIFRENKITGSFLPFFDEDRLKNLGVSSLEERKKMIECFQKLNQSRIDLRKVFN
DPIHGHVEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLV
EALAENQPDLEISERDKLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDKKWRHEQGSIE
MFEHLVKSNDLKLVMKNYGLDPDEDITFITELIMGPPLTPVKDSLWPYKGRPAKKSFLYE
IVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARICEVKYNNKGDKTFVRKVKH
ICTREKEVGNLYDMFHTRNCLHRRAYQHKVGNLIDIMITEAFLKADPYVEITGTDGKKFS
ISTAIDDMEAFTKLTDNIFLEILYSEDPRLSEAQSILRNIECRNLYKYLGETQPKGQKIT
KEEYGQLPQEVANAKPEMAPDAELKAEDFIVDVINMDYGMEDKNPIDHVHFYCKSNSKQA
VTITKDQVSQLLPEKFAEQLIRVYCKKKDRKSLDAAGKHFIQWCALRDFTKPQDGDIIAP
LITPLKWNKKTSSSIQEVSRVKACLKFEENVCS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaccagagccggagcagcctgctaagcggccccgctgcgatggcagcccaagg
acgccacagagcactcctcctgcagcagcgaaccagtctgcagaccccgactcccaaagc
agcgacctccgaacctgggatccggaggacgtgtgctccttcttagagaaatgtggtttc
caagagaagaaagtgctggacatcttcagagaaaataaaatcactggttcatttctgccc
tttttcgatgaggaccgtctcaaaaatctgggagtaagttccttggaggagaggaagaag
atgatagaatgtttccaaaagctgaatcagtctcggattgatctaaggaaggtatttaat
gatccgatccatggtcatgttgagttccaccccctcctcatccgaatcatcgacacacct
cagttccagcggcttcgatacatcaagcagctggggggcggctactatgtcttccctgga
gcgtcacacaaccgcttcgaacacagtctcggagtggggtacctagcgggctgcctcgtt
gaagcacttgcggaaaaccagccagacctggagatcagtgagcgggataagctctgcgtt
cagatcgcagggctctgccatgacctaggtcatgggccattttctcatatgtttgatgga
agatttatcccacttgcacgcccagacaaaaagtggaggcacgaacagggctcgattgag
atgtttgagcatctggttaaatctaatgacctcaaacttgtcatgaaaaactatggtctc
gaccctgacgaagatattacctttatcacggaactaattatgggaccacctctaacacca
gtcaaagatagtttgtggccgtataaaggacgccctgccaagaagagcttcctttacgag
atagtggctaacaaaagaaatggcatcgatgtggacaagtgggattatttcgccagagac
tgtcatcatcttggaatccaaaataattttgattacaagcgcttcattaagtttgcccgt
atctgtgaagtgaaatacaacaacaagggcgacaagacctttgtccgtaaggtgaagcac
atttgtacaagagaaaaggaggttggaaatctgtatgacatgttccacacacgcaactgc
ctacaccgcagagcttatcagcacaaagtcggcaacctcatcgacatcatgattacagag
gctttcctcaaagcagacccgtacgtggagattacagggactgacggaaagaagttcagt
atttccacggccattgatgacatggaagccttcactaagctgacagataacatttttctg
gagattttgtactctgaggatccacggttgtctgaggcccaaagtattctaaggaatatt
gaatgccgtaatctatacaagtatttgggtgagacccagccgaaaggtcagaagattaca
aaggaagaatatggacagcttccccaagaagttgctaacgccaaacctgaaatggcccct
gatgctgagctgaaggctgaggattttatagttgatgttatcaatatggattatgggatg
gaagacaagaatccaattgatcatgttcacttctattgtaagagcaacagcaagcaagct
gtcacgatcactaaagatcaggtgtcacagctgctgccggagaaattcgcagagcagctc
attcgagtgtactgtaagaagaaggacaggaaaagcctggatgccgccgggaagcacttc
atccagtggtgcgcgctcagggacttcaccaagccgcaggatggtgacattatagctcca
ctcataacccctctgaaatggaataagaagacttcatcttccatccaagaagtatccaga
gtaaaagcatgcctgaagtttgaagagaatgtctgcagttag
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