Apodemus sylvaticus (European woodmouse): 127686199
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Entry
127686199 CDS
T10613
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127686199 (Chd6)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127686199 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
127686199
NCBI-ProteinID:
XP_052040142
LinkDB
All DBs
Position
5:complement(146466833..146639589)
Genome browser
AA seq
2710 aa
AA seq
DB search
MKMKIQKKEKQLSKLRALNHSPMSDASVNFDYKSPSPFDCSPDQGETIEEAANHCLPQKD
LYTTEEETDTLFPRKLTSHNGMEDSGGRGTGVKKKRKKKEPGEQEGTKRSQGREAKPKRK
REPKEPEEPRRAKEPKRAKEPKEPRQKDGVKKPRKPREASSTKEGKEKRSCPDYGSRTKS
KKASKEQGPTPVERKKKGKRKNETTVESLELDQSLPNPSLQSPEEPSESADSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASK
TVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHI
FTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPA
KVKEFESLQILPEVKHVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKASTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRLSDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRALLVYC
VKHYKGDEKIKSFIWELITPSKDGQVQILQNHSGLSAPVPRGRKGKKTKNQLLLPELKNA
DWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS
AEQGVTDGTSDIPERGNIDKEDSAEDKLDGLQKQTASPSDGSDGIFGEKKDDSQAAQDGS
DPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPESLGPANQGYWVQEEVFRRTSDMDL
INKEAQKRWTRREQADFYRTVSSFGVVYDQEKKAFDWTQFRVISRLDKKSDESLEHYFYS
FVAMCRNVCRLPTWKDDGPPDASVYVEPITEERAAKTLYRIELLRKVREQVLTCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DTQAPGSLCCLYQSNSKLYESLTCTPMSRTSESLESEPENLMKMESRDDHLCLPEGGLPD
ITCENFVSKVQEVISLDHDESLLPESLENMMYGKTGLSQEPRSFQEALSTNTQSRKNAIT
ISASRDEGQPPGIEAEITSASSLMSSLEAGVAKMNIKNGKHLLVSISKEGEPCCSETGRR
PGSVGHLEAKCLASPTLDTGHESGFVDLCSLSVFDSKRNFSSDQQLIDLLENKGLESKLI
LNQSDEEEEENEDETLAIAVSTTEKPEVLDFTKPTANIPRGKNLSFHQEEAKKGRLEVVS
KTPGPQRVFPALTNQCHCQHIERWAHGLGSEGSETERPKAYQPDLYRSKANNATVEGEPA
VTPTEPFKLKHELLKEPWKESSEGGKSFSMYVPEGSEPKPEDMDFENKDDYEKDGPIHSQ
DYPGKYSEEESKSSASGIAGDLGEETQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRLD
NICHVVLKGKWPCSHHYEPSGTLATPVIASSAGSRSSLSEPEATEHSFSNGAALAAQIQK
ESFLAPVFTKDEQKHRRPYEFEMERDAKARSLEEYSAAHGRPPLVLNGWHGESAIDLSCS
SEGSPGATSPFPVSASTPKIGAISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDDA
AMRRRRGRRKHMEGGMDLIFLKEQTLQAGILEVHEDAGQTTLSTTHPEGPGAASSAPEPA
AASSSQAEKAVPSKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDISSLG
GEESVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGSRRRGRRPRNELLKAPAIVADSPS
GMGPLFMNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEEVKNTLSMLPMML
PGMAAVPQMFGVGGLLNTPMATACTTTASASLASTKSGSSATEKTTEDKLGGRDVKADTL
VEDKPGPSPFSDQSEPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQAR
HSEMVGLETQKRKKKKAKGEKATPEPASACEQEPGSEQNCTKSSATVSPEREHVAQAREE
GLKDSNGDTN
NT seq
8133 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcagttgtccaagttaagagctctgaatcac
tccccaatgtcggatgcctctgttaactttgactacaaatctccgtcaccattcgattgc
agtcctgatcagggagagaccatcgaagaagctgccaatcattgtctgccccagaaggac
ctctatacgactgaagaggaaactgacaccctttttcctaggaaactgacatcccataat
gggatggaggatagtggaggcagaggtactggagtgaagaagaaacggaagaaaaaggag
ccaggggagcaagagggaacaaagagaagccagggcagagaagccaagccaaagaggaag
cgagagcctaaagagccagaagaacccagaagggccaaggagccgaagagagccaaggag
cccaaggaaccgaggcagaaagatggcgtgaagaagccccggaagccccgggaggcctcc
agtaccaaggaaggtaaagagaagaggagctgcccggattatggatccaggacgaagtcc
aagaaggccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaaaagg
aaaaacgaaaccaccgtggagagtttagagctggaccagagtcttccaaacccatctctg
cagagtcctgaggagcccagtgagtctgcagacagccagaaacggcgctcaggacggcaa
gtaaagcgcagaaaatacaatgaggatctggacttcaaagtggtggatgatgatggggaa
acaattgctgttctgggagctggccggacatctgcactctcagcctccactctggcctgg
caggccgaggagcctccagaagatgatgcaaacataattgagaagatcctggcatccaag
actgtccaggaggttcacccaggagaacctccatttgacctagagcttttctacgttaag
tatagaaatttttcctatttacattgtaaatgggccacaatggaagagctggaaaaggat
ccccgtatcgcacagaagatcaaacgatttaggaacaaacaggcccagatgaagcacatt
tttactgagcctgatgaagacttgttcaatccagattatatagaaatcgatcgtatctta
gaggtggcccacaccaaggatgcagagacaggggaggaagtaacacattacctggtaaaa
tggtgctccctgccgtatgaagaaagcacctgggagctagaagaagatgtggatcctgca
aaagtgaaagaatttgaatctctacaaattctccccgaagttaagcacgtggaaagacct
gcctctgacgcatggcagaagctggagacttctcgtgagtataagaacagtaaccggctg
cgagaataccagctggagggaatgaactggcttcttttcaactggtacaatagaaaaaac
tgtattttggctgatgaaatgggcctagggaaaaccatccagtccatcgcattcctttca
gaaatctttgtcaggggaatccacggccccttcctcatcatcgcccctctttccactatc
actaactgggagcgggaattccggacatggacggagatgaatgctattgtgtaccacgga
agccagatcagcaggcagatgatccagcagtacgagatggtgtacagagatgcacaggga
aaccctctttcaggagtcttcaagttccatgtcgtcatcacaacatttgagatgatcctg
gcagattgcccagagctgaagaaaattcactggagctgtgtgataattgatgaggcacac
agattgaagaatagaaactgcaaacttctggaagggttaaagcttatggccctggaacat
aaagtgctgctcacaggaacacccttgcagaactctgtggaagagctcttcagtttgctt
aactttctggagccctcacagtttccttcagagactgctttcttagaggagtttggcgat
ctcaaaacggaagaacaggtaaagaaattgcagtctatcctaaaaccaatgatgcttcgg
cgcctgaaagatgatgtggagaagaaccttgctcctaagcaagagaccatcattgaagta
gaactaaccaatatccagaaaaagtactatcgtgctatcctagagaaaaacttttccttc
ctaaccaaaggtgcaaatcagcacaacatgcccaatcttatcaatactatgatggagctg
agaaaatgctgtaaccacccctacctgatcaatggggcagaggaaaagattctggaagat
ttcaggaaagcccacagctctgaagcctctgacttccagctacaggccatgatccaggca
gcagggaagctggtcctgattgacaagcttctccccaaactcattgcagggggccacaaa
gtgctcatcttctctcagatggtgcgctgtctggacatcctggaagattatctcatccag
aggagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagcc
atcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccagagcg
ggaggcctgggaatcaatctcacagctgctgatacctgcatcatatttgattctgactgg
aacccacaaaatgatttgcaggctcaggcacggtgtcatcgtataggccagagcaaagcc
gtaaaggtatatcgcctaatcactcgaaactcctatgagcgggaaatgtttgacaaggcc
agcctgaagctgggcctggacaaggctattcttcaggacatcaacagaaaggccagcacc
aatggagtacagcagctctcaaaaatggaggtggaggatttactccggaaaggtgcctat
ggcgctttaatggatgaggaggacgaaggctccaagttctgtgaagaagacatagaccag
attctgcagagaagaacccacaccatcaccatccagtcagaagggaaggggtccaccttt
gccaaggctagtttcgtggcttcaggaaacagaacagatatttccttggatgatcctaat
ttttggcagaaatgggctaaaatagctgaactagacactgaagcaaataatgaaaaggaa
agcttagtgattgaccgaccacgtgtgaggaagcagaccaaacactacaactcttttgag
gaggatgagcttatggaattctcagaattagacagcgactcagacgaaaggcccacaagg
tccaggcgcctcagtgacaaagccagacgctacctccgtgctgagtgcttcagagtagag
aagaacctactcatctttggctggggccggtggaaggacatcctgactcacgggcgattc
aagtggcccctgaatgagaaggatatggagatgatttgccgggccctgctggtgtactgt
gtcaagcattacaaaggggatgaaaaaatcaagagttttatttgggaactaatcacacct
tccaaagatgggcaagttcagatcctccagaaccactcaggcttgtctgccccagtcccc
agagggagaaaaggaaaaaagacaaaaaaccagctcttactcccagaactgaagaatgca
gactggctggccacctgcaatcctgaggtggtcttacatgatgatggatacaagaaacac
ctcaaacagcactgtaataaggtgcttttgagagtccggatgctatactacctaaaagct
gaaatattgggagaagcagctgataaagcatttgagggaactcctgccagagagctggac
gtgcttctgcctgacattgactatgtggagatcccagtggactggtgggatgctgaagct
gataagtcccttctaattggcgtgtttaagcatggttatgagaggtacaatgccatgcgg
gctgacccagcgctctgcttcctggagaaggtcggcatgcctgatgagaagtccctttct
gcagagcagggtgttacagatggaacctcagacattcctgaaagaggcaacatagataaa
gaagacagtgctgaggacaagttagatggtctccagaagcaaacggcgagtcccagtgat
ggaagtgatggcatttttggtgaaaagaaggatgacagccaggcagcccaggatggctcc
gacccagacaaatcaccctggccagtttcctctgccctcactgctcgactcaggcgcctg
gtcactatttaccagcgctgcaaccgcaaggagctgtgcagacctgaaagcttaggccca
gctaaccaaggatactgggttcaggaggaggtgttcaggagaacttcggacatggacctc
atcaacaaggaagcccaaaaaaggtggactagaagagagcaagctgacttctatagaaca
gtgtcttccttcggtgttgtgtatgaccaagaaaagaaagcctttgactggacacagttc
cgtgtcatttctcgtttggacaagaagtcagatgagagcctggagcactatttttatagt
tttgtagccatgtgtcggaatgtgtgtcgtcttcccacgtggaaagatgatggtccccca
gatgccagcgtctatgttgaacccatcactgaggagcgggcagcgaagactctgtaccgc
attgaactgctgaggaaagtccgtgagcaggtgctcacatgtcctcaactacatgagcgc
ctccagctttgcaggcccagcctctacctcccagtctggtgggagtgtgggaaacatgac
cgagacctgctcattggcaccgccaaacatgggctcaaccgcacagactattacatcatg
aatgacccccagctatccttcctagatgcctatagaaactatgcccaacacaaaaggact
gacacccaggcaccgggaagtctctgttgcctttaccagagcaactctaaactatacgag
tctcttacttgcacccctatgagtaggacttcagagtctctggaaagtgagccagagaat
ctgatgaaaatggaaagcagggatgatcatctctgccttcccgagggcggcttacctgac
ataacatgtgaaaactttgtttccaaagttcaggaggtcatttctcttgaccacgatgaa
agcttgctgcctgagtctttggagaacatgatgtatggtaagacaggactcagccaagag
ccacgttcttttcaggaggccctaagtaccaacacacagtccaggaaaaatgctattacc
atctcagccagcagagatgaaggccagcctccaggtattgaggcagaaattacttcagct
tcctctctcatgagcagcttagaagcaggagtagctaaaatgaatattaaaaatggaaaa
catttgttagtatctatctcaaaagagggggagccctgctgcagtgagacagggcggaga
cctggaagcgtaggccacctagaggccaagtgcttagcgtcccctaccttagatacagga
catgagagtggatttgtagatctatgcagtcttagtgtctttgactccaaaagaaacttc
tcatcagatcagcaattaattgatttattagaaaacaagggtttagaaagtaagttgatt
ttgaatcagagtgatgaggaagaggaagaaaatgaggacgaaaccttagccatagcagtg
agcaccacagagaagccggaggtcttggacttcaccaagcccaccgcgaacatcccacgg
ggaaagaacctcagcttccaccaggaggaagccaagaaaggaaggctggaggtggtaagc
aagactccgggaccacagagggtctttcctgccttgaccaatcaatgccactgccaacac
attgaaaggtgggcacatggcctggggagcgaaggatctgaaacagagaggcccaaggct
tatcagccagacctgtacagaagcaaagccaataatgccacagtggaaggggagcctgct
gttactccaacagagccatttaaactgaagcatgagcttttaaaagaaccgtggaaagaa
agttcagagggggggaagagtttctccatgtatgttcctgagggaagtgaacccaaacca
gaagacatggattttgagaataaagatgattatgagaaagacggacccatccacagtcaa
gactacccaggcaaatactctgaggaggagagtaagagttcggcatcaggcattgcagga
gaccttggggaagagacacaggaagtgcgggctcccaccatcgctcagctgctgcaggag
aaaaccctctattccttctcggaatggccaaaggatcgtgtgataattaaccgcctagat
aatatttgccatgtggtgttaaaggggaagtggccctgcagccaccactatgagccctca
ggtacactggccacaccagtgatagccagcagtgcaggctctcgaagcagcctctcagag
ccagaagcaacagaacacagcttcagcaacggtgcagcattggcagcccagatccagaag
gagagcttcttagccccagtattcacaaaagatgaacaaaagcacagacgtccctatgag
tttgagatggaaagggatgccaaagctcggagcctagaagaatactctgctgcccatggg
cgcccaccccttgtcctcaacggctggcatggggagtcagctatagacctctcctgctca
tcagaggggtctccaggagccacatcccctttccctgtgagtgccagcacccctaagatt
ggtgctatcagttcacttcaaggagccctcggtatggacttgtctggaattctgcaagct
ggcctaatccacccagtgactggacagattgtcaatggaagcctcaggagggacgacgct
gccatgagaaggcggagagggaggcgaaaacatatggaaggagggatggacctcatcttt
ctgaaggagcaaacacttcaggctggaatcttggaagtccatgaagatgcagggcagact
accctgagcaccacacaccctgaagggccaggagctgcttcctcagctcctgagccagca
gcagcatccagcagccaggctgagaaagcggttcctagcaagagcctacttgactggctg
cggcagcaggctgactattctttggatgttcctggctttggggcaagtttttcagacaaa
cccaagcagaggagaccacgttgcaaagaacctggaaaattagacatcagctctctaggt
ggagaagagagtgttcctgctgtccccaaggagccaggactgagggggtttctcccagaa
aacaaattcaatcacaccctagctgagcctgtgcttcgagatgcaggctcccgcagaaga
gggaggcggcctcggaatgaactcctaaaagctccagccattgtagcggactctccttct
ggaatgggaccactgttcatgaatgggctgattgcagggatggacctggtaggattgcag
aatgtgagaaatattccaggcattcctctcactgggctggtgggcttcccagcgggtttt
gccaccatgcctactggtgaagaggtcaaaaacaccctgagcatgctgcccatgatgctg
ccaggcatggccgcggtgccccagatgttcggtgttggcggactcctcaacacacccatg
gcaactgcctgcacgaccactgcatcagcgtctcttgcaagcacaaaaagtggttcctca
gccactgagaaaactacagaggacaagctgggcggccgtgatgtgaaggcagacactctg
gtggaggataagcctggccctagtccgttttctgaccagtccgaacccacaataactact
agtagtcctgtggctttcaacccatttctcatcccaggagtgtctcctggactcatctac
ccttccatgtttctttcccctggcatgggcatggctctgccagccatgcagcaggccaga
cactcagagatggtcggtcttgagacccagaagaggaaaaagaagaaagcaaagggggag
aaggccaccccagagcctgcttctgcctgtgagcaggagccaggcagtgagcagaactgc
accaagtccagtgccactgtgtccccagagagagagcacgtggcacaggccagggaagag
ggcctcaaagactccaatggcgataccaattag
DBGET
integrated database retrieval system
