Apodemus sylvaticus (European woodmouse): 127686335
Help
Entry
127686335 CDS
T10613
Symbol
Stx16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127686335 (Stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127686335 (Stx16)
Membrane trafficking [BR:
asyl04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
127686335 (Stx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
ATG17_like
DUF5345
Syntaxin
MCPsignal
DUF6548
DUF2116
TRP
Motif
Other DBs
NCBI-GeneID:
127686335
NCBI-ProteinID:
XP_052040412
LinkDB
All DBs
Position
5:159956102..160008306
Genome browser
AA seq
326 aa
AA seq
DB search
MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHTTSSPLHSRSIAAELDELADDRMALVSGI
SLDPEAAIGVTKRSPPKWVDGVDEIQYDVGRIKQKMKELAGLHDKHLNRPTLDDSSEEEH
AIEITTQEVTQLFHRCQRAVQALPSRARRACSEQEERLLRNVVASLAQALQELSTSFRHA
QSDYLKRMKNREERSQHFFDTPVPLMDDGEDAALYGQGFTDDQLVLVEQSTLMVEERERE
IRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCVKTEDGLEQLHKAEQYQKKN
RKMLVILILVAIIVVLIVVLIGVKSR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggcgtttaaccgacgctttcttgttgttgcggaataattccatccaaaac
cggcagctgttagccgagcaagtgagtagtcacaccacctccagccctctgcattcacgt
agcattgctgcggagctggacgagcttgctgatgatcgcatggcactggtgtcaggcatc
agcctagatccagaagcagcaattggtgtgacaaagcggtcacctcccaagtgggtggat
ggagtggacgaaatccagtatgatgttggccgcatcaaacagaagatgaaggagttagcc
ggccttcacgataagcatttgaacagacctaccctggatgacagcagcgaggaagaacat
gccatcgagatcaccacccaggaggtcacccagctcttccataggtgccagcgtgctgtg
caggccctgcccagccgggcacgaagggcctgctcagagcaggaagaacggctactgcgc
aacgtggtggcctccctggcacaggccctgcaggagctgtccaccagcttccggcatgca
cagtccgactacctgaaacgcatgaaaaaccgagaggaaagatcacagcatttcttcgac
accccagtaccactaatggatgatggagaagatgctgctctctatggtcagggtttcacg
gatgaccaactggtgctggtagagcagagcacactgatggtggaggaaagggagcgagag
atccgtcagattgtacagtccatttcagacctcaatgagatcttcagggacttgggggcc
atgatcgtggagcagggtacagtccttgacagaattgactataatgtcgaacagtcctgt
gtcaagactgaagatggcttggaacagcttcacaaggcagagcagtaccagaagaagaac
cggaagatgcttgtgatcttgattctggttgccatcatcgtagtcctcattgtggtcctc
atcggcgtaaagtctcgctag
DBGET
integrated database retrieval system
