Apodemus sylvaticus (European woodmouse): 127686361
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Entry
127686361 CDS
T10613
Symbol
Taf4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03022
Basal transcription factors
asyl05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127686361 (Taf4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
127686361 (Taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asyl03021
]
127686361 (Taf4)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127686361 (Taf4)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127686361 (Taf4)
Coactivators
SAGA/TFTC/STAGA complex
127686361 (Taf4)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127686361 (Taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
127686361
NCBI-ProteinID:
XP_052040457
LinkDB
All DBs
Position
5:complement(163126979..163199895)
Genome browser
AA seq
1037 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGN
HVVSGSPAGAAGAGPAASAEGAPAAAPEPPPAGRARPAGGGPRRPGSSSPRRLLVPAGPA
PAPAKLRPPPEASAGPCPVAAAATVAAAAGPDPAAAAPPAGPGASKPGPPGPPGPGAAQT
LNGSAAPPTAPHAAPAVSPVNNGPAPPPAAGSVIQAAPAPAAPSPPAAPAPAAPPPPAPP
APVAPARPPGHPAAPAPPVSPAAAAAAAAAQNGAAPAPAAASGGAAGLGQPGAGAQGAKA
EAPKPGPGPGPGSAAAAAAAAAGVAGGGAAGGVLLGPAMPGALPGPVPGTPAGLAKGAAV
ATPSLPRTPAATTGAIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLM
IPQQALAQMQAHAQAQPQSTMAPRPATPTGAPPVQISTVQAPGTPIIARQVTPTTIIKQV
SQAQTTVQPTTTLQRSPGVQPQLVLGGSAQPASLGTATAVQTGTPQRTVPAASTTSTAAT
ETMENVKKCKSFLSTLIKLASSGKQSTETAANVKDLVQNLLDGKIEAEDFTSRLYRELNS
SPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPPASQATTALTAVVLSSSVQRTAGK
TAASVTSALQPPVISLTQPTQVGVGKQAPPTPLVIQQPPKPGALIRPPQVTLTQTPMVAL
RQPHNRIMLTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLKEPGGGSF
RDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRILEIGKK
HGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFE
QLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTA
LAAIGPRKKRKVDCTGPGSGAEGSGLGAAVPGGSGVGTPRQFTRQRITRVNLRDLIFCLE
NERETSHSLLLYKAFLK
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgatctggtgggctcgcttgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcctccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggtggg
ggcccgcggcgcccgggctccagctcaccgcgccgcttgcttgttcccgcagggcccgcg
ccggcgcccgccaagctgaggccgccgcccgaggccagcgcggggccctgccccgtcgcc
gccgccgccaccgtcgccgccgccgcggggccggatcccgccgccgccgccccacccgcc
ggccccggcgcctccaagcccggcccgcctggcccgcccggccccggcgccgcgcaaact
ttgaatgggagcgccgcgccgcccaccgcgccgcacgccgcacctgctgtcagcccggtc
aacaacgggcccgcgccgccgcccgccgccggctctgtcatccaggcggcccccgcgccc
gccgcgccctcgccgcctgccgcgcccgcgcccgccgcgcccccgccgcccgcgccccca
gcgcccgtcgcgccagcccggccgcccgggcaccccgccgcgcccgcgccccccgtgtca
cccgccgccgccgccgccgccgccgccgcgcagaacggggccgctcctgcccccgccgcg
gcctccgggggcgccgcggggttgggccagccgggtgcgggtgcgcagggggccaaggcc
gaggcgcccaagcccggaccgggtcccgggccggggtcggcggcagcggcggcggcggcg
gcggcgggggtcgcgggcgggggcgcggcgggtggtgtgttgctcgggcccgctatgccg
ggcgcgctgccggggcctgtgcccgggacccccgcggggctggcaaagggcgcggccgtg
gcgacccccagcctgcctcggacgccggcggccaccaccggtgctatccgggccacgctg
acgcccaccgtgctggccccgcgcctgccgcagccgccgcagaacccgaccaacatccag
aacttccagctgcccccaggaatggtcctcgtgcggagtgagaatgggcagttgttaatg
attcctcagcaggccctggcccagatgcaggcccatgcccaggcccagcctcagagtacc
atggcaccccgtcctgcaacccccacaggtgctccacctgtccagatctccactgtgcag
gctccaggaacacctattattgcacggcaggtgaccccaaccaccataattaagcaagtg
tctcaggcccagacgacggtacagcccactacaaccctacagcgctctcccggggtacag
ccccagttggttttgggtggctccgcacagccagcctcacttggaacagccacagccgtt
cagacagggacacctcaacgtacagtccccgcggccagcaccacctccacagctgctacg
gaaactatggaaaatgtgaaaaaatgcaaaagttttctatctacattaataaaactggct
tcctctggtaaacagtctacagagacagcggctaatgtgaaagatttagtacaaaactta
ctggatgggaaaattgaagcagaagatttcactagcaggttatatcgagaactgaactct
tcacctcagccttaccttgtgcctttcctgaagaggagcttacctgccttgagacagctg
accccagactccgcggccttcatccagcagagccagcagcagcagccgcctgcctcgcag
gccacgactgcactgacagctgtggtgctgagcagttcggtgcagcgcacagctgggaag
acggctgcctcggtgaccagcgccctccaacccccggtcatcagcctcacgcagcccaca
caggttggcgttggcaaacaggcgccgcccacaccactggtgatccagcagcccccgaag
cctggagccttgatccggcccccgcaggtgaccttgacgcagacacccatggtcgcattg
cggcagcctcacaaccggatcatgctcaccacaccacagcagatccaactgaaccagctg
cagccagtccctgtggtgaaacctaccgtgttacctggaaccaaagccctttctactgta
tctgcacaagcagctgctgcacagaaaaacaagctcaaggagccagggggaggctccttc
cgggatgatgatgacatcaatgatgttgcgtcaatggctggagtgaacctgtctgaagaa
agtgcaaggatattggccacaaactctgagttggtggggacgttgacccgatcctgtaaa
gatgacaccttcctcctccccgcgcctttgcagaggaggatactggaaataggtaaaaag
cacggcatcacggaactgcatccagatgtagtgagttacgtgtctcatgccacacagcaa
aggctgcagaatcttgtagaaaaaatatctgaaacggctcagcagaaaaacttctcttat
aaggatgatgaccgatacgaacaagcaagtgatgtccgggctcagctcaaattctttgaa
cagctggatcagattgaaaagcagaggaaagatgagcaggagagggagatcttgatgcgg
gcagcaaagtctcgatccagacaagaagacccagagcaattaaggttgaagcagaaagca
aaagagatgcagcagcaggagctggcacagatgcggcagcgggatgccaacctcactgca
ctggcagcgatcgggcccaggaaaaagaggaaagtggactgcactgggccaggatcggga
gcagagggctcaggcctgggcgcagcagtcccaggcggctccggcgtgggaacccccaga
cagttcacacggcaaagaatcacgcgggtcaacctcagggacctcatattttgtttagaa
aatgagcgtgagacaagccattcactgttgctctacaaagcattccttaagtaa
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