Apodemus sylvaticus (European woodmouse): 127686364
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Entry
127686364 CDS
T10613
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03082
ATP-dependent chromatin remodeling
asyl05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127686364 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
127686364 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127686364 (Ss18l1)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127686364 (Ss18l1)
GBAF(ncBAF) complex
127686364 (Ss18l1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
127686364
NCBI-ProteinID:
XP_052040463
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All DBs
Position
5:163260783..163287422
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPPASLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPTSQSVPMQGQGAISNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQSYDRS
FEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtcggcgcggccgagaggcaaaggggaggtcactcagcagacc
atccagaagatgctggatgagaaccaccacctgatccagtgcatcctggactaccagagc
aagggcaagacagctgagtgcacccagtaccagcagatcctgcatcggaacctggtctac
ctggccaccatagcagattccaaccagaacatgcagtctctgctacctgcgcctccaaca
cagaacatgaacctcggccccggagcactgagtcagagcggttccagccagggcctgcac
ccccagggcagcctcagtgataccgtcagcacaggcctgccccctgcctccctcatgcag
ggccagatcggtaacggtccaaaccacgtgtccatgcaacagacggcccagagcacactg
cccacaacctccatgagcatgtcaggcagtggccatggtactgggcctgggtacagccac
tcgggacctacctcgcagagtgtccccatgcaagggcaaggtgccatcagcaactatgtg
tctcggaccaatatcaacatgcagtccaacccagtctccatgatgcaccagcaggcagcc
acgtcccactacaactcagcacagggcggaagccagcattaccagggacaggcgcccatt
gccatgatgggccagggtggccaaggaggcagcatgatgggacagcggcccatggcaccc
taccgaccctcccagcaaggctcttcccagcagtatctgggccaggaggagtactacagt
gaacagtacagccacagccagggctctgcagagcccatgagtcaacagtactacccagac
ggccacggtgactacgcctatcagcagtcatcctacacagagcagagctatgaccgctcc
tttgaggatcccacacagcactactacgaggggggaaattcccagtacagtcagcagcag
gctgggtaccagcagggcacagcacagcagcagacctactcccagcagcagtatcccaac
cagcagagctacccggggcaacagcagggctacggccctgcccagggagccccctcacag
tactcaagctaccagcaaggacaaggtcagcagtatggaagttacagaacatcgcagacg
ggaccttctgcccagcagcagcggccgtatggctatgagcagggccagtatggaaattac
cagcaataa
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