Apodemus sylvaticus (European woodmouse): 127686412
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Entry
127686412 CDS
T10613
Symbol
Sox18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127686412 (Sox18)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127686412 (Sox18)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127686412
NCBI-ProteinID:
XP_052040589
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All DBs
Position
5:complement(164908692..164910503)
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AA seq
377 aa
AA seq
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MQRSPPGYGAQDDPPSRRDCAWAPGLGAAAEPRGLPVTNVSPTSPVSPSSLPRSPPRSPE
SGRYGFGRGERQTADELRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKEL
NTAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKVRRLEPGLLLPGLVQPSAPPEP
FVAVSGSGRSFRELPTLGAEFDGLGLPTPERSPLDGLESGEASFFPPPLAPEDCALRAFR
APYTPELARDPSFCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPFPNPLSPPPEASSLE
GTEQLEPTADLWADVDLTEFDQYLNCSRTRPDATTLPYHMALAKLGPRAMSCPEESSLIS
ALSDASSAVYYSACISG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcgccgcccggctacggcgcacaggacgacccgccctcccgccgcgactgt
gcatgggccccgggactcggggccgctgctgagccccgcggcctccctgtcaccaacgtc
tcgcccacctcgcccgtctcgccgtccagccttccgcggagtccaccgcgcagccccgag
tcaggacgctatggctttggccgcggggagcgccaaacggccgacgagttgcgcatccgg
cggcccatgaacgccttcatggtgtgggcgaaggacgagcgcaagcgactggcgcaacaa
aatccggatctgcacaacgccgtgctgagcaagatgctgggcaaagcgtggaaggagttg
aacaccgcggagaagcggcccttcgtggaagaggccgaacggctgcgtgtgcagcacttg
cgcgaccatcccaactacaagtaccggcctcgccgcaaaaaacaggcgcgcaaggtccgg
aggctggagcccggcctcttgctcccaggcctcgtgcagccgtctgcgccgcccgagccc
ttcgttgcagtatcaggctcaggtcgctcctttcgcgagctacccactctgggtgcggag
ttcgatggcttggggctacccacgcccgagcgctcgcctctggacggcctggagtctggc
gaggcctccttcttcccaccgcctttggcgcctgaggactgcgctctgcgggctttccgg
gcgccctatacccccgagctggcacgggacccgagcttctgctacggggcgcccctggct
gaggcgctcaggacagcgccgcctgccgcgccgctcgcgggcctctactatggcaccctg
ggcactccgggcccgtttcccaaccctctgtcaccaccacctgaagcctcttctcttgaa
ggcacagagcaactggagcctaccgccgacctttgggccgatgtggacctcaccgaattc
gaccagtatctcaattgcagccggactcgaccggatgccactacacttccctaccatatg
gcactggccaaactaggtccgcgcgccatgtcctgtccagaggagagcagtctcatttct
gcgctgtctgacgctagcagcgcggtctattacagcgcttgcatctcaggctag
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