Apodemus sylvaticus (European woodmouse): 127686987
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Entry
127686987 CDS
T10613
Symbol
Sec31b
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127686987 (Sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127686987 (Sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
asyl02044
]
127686987 (Sec31b)
Membrane trafficking [BR:
asyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127686987 (Sec31b)
Secretion system [BR:
asyl02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
127686987 (Sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_RFWD3
EIF3I
Beta-prop_EML
TPR_Sec16
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
127686987
NCBI-ProteinID:
XP_052041120
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Position
1:17114346..17141864
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AA seq
1161 aa
AA seq
DB search
MKLKELEKPAVQAWSSARQYPVYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDLKRK
GILSVSSRFHKLVWGGLGSGLPENSGVIAGGGDSGVLTLYNVTHILSSGKEPLIAQKQKH
TGAVRALDFNPFQSNLLASGASDSEIFIWDLNHLTVPMTPGSKSQSPPEDIKALSWNRQV
QHILSSAHPSGKAVVWDLRKNEPIIRVSDHSSRMNCSGLAWNPDIATQLVLCSEDDRLPV
IQLWDLRFASSPLKALESHSRGILSMSWNQADAELLLSTAKDNQIFCWNLSSSKVVYKLP
TRSSWCFDVQWCPQSPPVFSAASFDGWISLYSVMGRSWEAQHMRQADKVPEQVAQASLIP
PLKKPPKWMRRPAGGSFAFGGKLVTFGLPSIPVQPGAQPCPRPVFISQVITESEFLTRSA
VLQEALASGNLHNYCQSKIQKASLSCEKMLWQFLKVTLEHDSRPKFLKLLGYSRDELQKK
VDTCLKSDSKSQESPQLEAVDLKSDRAHSPCTQASKHTAKEASASSAFFDELIPQSMTPW
EIPTTEDTDGLLSQALLLGELRCAVELCLKEERFADAILLAQAGDAELLKWTQERYLAKR
RTRTSSLLACVVKKNWKDLVYACSLKNWREVLALLLTYSGPEKFPELCDMLGTHMEQEGG
RALTSEARLCYVCSGSVERLVENWAKFQQASSPTALQELMEQVMVLRGSLELLQGSNKMS
PGPATTHRLTQYASLLAAQGSLAIAMGFLPSDCIQPAVQQLRDRLFHAQGSTVLGQQAPA
FPFPRVAVGAALPSKETSSYRMGSQPPGQVPAPSVRLRATAQPSLVMPFISPHPSPSQGS
WTQSSGDCRVPGPQATLPVHLVPGVRPASSGPQPSRGPSVPAVNPAGFWGAWPLPGPAPV
MASPDIMQPGSTHLPETPRLLPLPPVGPPGPRPLSSQPSASPVTFSMAHPAGGPGAPCTG
ALPSPAILATHPGSQDAWNIASQGNLQKKKLPETFLPPAPITAPLRSLGPEPQQALLPQP
LVSSESLPPPGAPRECSLQQLQPLSPEKMKKELPPEHRCVKDSFEALLQRCSLTATDLKT
KRKLDEVAHRLECLYEKLCEGALSPHVLAGLHEVARCVDAGSFEQGLAVHAQVASCSSFS
EVSSFMPVLKALLTIAHKLQG
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaggaacttgagaagccagctgtccaagcatggagctcagccaggcagtac
cctgtgtatctggccacaggaacatctgctcagcaactagatgcctcctttagcacaaat
gccaccctggaaatatttgaggttgacttcagggatccttctctggacttgaaacgcaaa
ggaattctttctgtctccagcaggtttcacaagctagtctggggaggccttggcagtggg
cttccggaaaactctggggttattgctggtggaggagacagcggcgtgcttaccctatac
aatgtgacccacatcctttcttcagggaaggagcccttgattgcccagaagcagaagcac
acgggagctgttagagccttggacttcaatcccttccagagcaatctcctggcctcagga
gccagcgattctgaaatcttcatttgggatttgaaccacctgactgttccaatgacacct
ggatccaagtcacagagccccccagaggacattaaagcgctgtcttggaaccgccaagtc
cagcacattctgtcttccgctcaccccagcggcaaggcagttgtgtgggatctcaggaag
aacgagcccatcatcagagtcagcgaccacagcagcaggatgaactgctcaggcctggcc
tggaacccagacatagccacccagttagtgctgtgctcggaagatgacaggctcccagtg
attcagctgtgggacctgcgctttgcctcctcacccctgaaggcgctggagagccacagc
aggggcatcttgtccatgtcctggaaccaggctgatgctgaactgctgcttagcactgcc
aaagacaaccaaattttttgctggaacctgtcaagcagtaaggtggtctacaagctcccc
acacggagcagctggtgctttgacgttcagtggtgtcctcagagccctcccgtgttctct
gctgcctccttcgatggctggattagtttgtactctgtgatgggtaggagctgggaagcc
cagcatatgaggcaggctgacaaggtgcctgagcaggtggcccaagcatcgctaatccct
cccttgaagaagcctcccaagtggatgagaaggccggcaggcggttcatttgcttttggg
ggaaagttagttacttttggccttcccagcatccctgtccagccaggggcacagccttgt
ccccgccctgtcttcatcagtcaagtcatcacagagtcagaattcctgactcggtcagct
gtgctacaggaggccttggcatccggaaatctccataattattgtcagagcaagattcag
aaagcttccctgtcatgcgagaagatgctctggcagtttctgaaggtgaccttagagcac
gattccaggccgaaattcctcaagctgttaggttacagcagagatgagcttcagaagaag
gtggacacatgcctgaagagtgactcaaaatcacaggaaagccctcagcttgaggcagtt
gacctcaaaagtgacagagcgcacagcccttgcacccaggcctccaaacacactgccaag
gaagcctctgcatcctcagccttcttcgatgagctgatacctcagagcatgactccctgg
gagatccccaccacagaagacactgatggactcctgagccaggccctgctgctcggggaa
ctgcggtgtgctgtggagctgtgtttgaaggaggaacgctttgctgatgccatcctcctg
gctcaggccggagatgcagagctgctcaagtggacacaagaacgctacctggccaagagg
agaaccagaacctcctcgcttctagcctgtgttgtaaagaagaactggaaggacctggta
tatgcctgtagcctgaagaactggagagaggtgttggccttgctgctgacatattcaggg
ccagagaagttccctgaactctgtgacatgctgggaactcacatggagcaggagggaggc
agggccctcacctctgaagccagactctgctatgtgtgctcagggagtgtggagcggctg
gtagagaactgggccaaattccagcaagcctcaagccccacggctctgcaggagctaatg
gagcaggtgatggtcctcagggggagcctggagctccttcagggttctaacaagatgagc
ccaggtcctgccacaacacacaggctcacccagtatgccagtctcctggcggcccagggc
agcctggccattgccatgggcttcctacccagtgactgtatccagccagcagttcagcag
ctgagagaccgtctcttccatgcccaaggttctaccgtcctgggccaacaggctccagcc
ttcccgttcccccgagttgctgtaggagctgccctcccctcaaaagagacatcctcatac
aggatgggatcccagcctcctggacaggtcccagctccatctgtgaggctgagggccaca
gctcagccgtcactggtgatgcccttcatctccccccatcccagcccttctcagggctca
tggacacagtcatcaggtgactgccgggtccctgggccccaggcaaccctgcctgtgcat
cttgtccctggagtaaggcctgcttcatctgggccccagccgtccagaggaccaagtgtt
ccagccgtaaacccagctggattctggggagcgtggcctcttcctggccctgctccagtc
atggcgtccccagacatcatgcagcctggctctacccacctgcctgaaactcccagactc
ctccctctgccccctgtgggacctccaggtccccgccctctgagctcccagccctcagcc
tctcctgtcactttctctatggctcaccctgctgggggcccaggagcaccgtgcactggt
gccctcccgagtcctgccatcttggccactcatccaggatcccaggatgcctggaacatt
gcctctcagggaaacctccaaaagaaaaagttgcctgagacatttctgcctccagcccca
attacagctccacttaggagccttggccctgagccacaacaggccctgctgccacagccc
ctggtctccagtgagagcctgcctcctcctggagccccaagagaatgcagcctgcagcaa
ctccagccactctctcccgagaagatgaagaaggagctgcctccagagcatcggtgtgtg
aaggacagctttgaggcactccttcagcgctgttccctgaccgccactgacctaaaaacc
aaaaggaagctggatgaggtagcccaccgtctagaatgtctgtatgagaagctttgcgag
ggggcgctctcaccccacgtcctggctgggctccacgaagttgcccgatgtgtggatgca
ggaagctttgagcagggcctggcggtgcatgcccaggtggcgagctgcagcagcttcagc
gaggtatccagcttcatgcctgtcctgaaggctctcctcaccatcgcacacaagctgcag
ggctaa
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