Apodemus sylvaticus (European woodmouse): 127687021
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Entry
127687021 CDS
T10613
Symbol
Cpsf2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127687021 (Cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127687021 (Cpsf2)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127687021 (Cpsf2)
U7-dependent histone pre-mRNA processing factors
127687021 (Cpsf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
127687021
NCBI-ProteinID:
XP_052041177
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Position
6
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AA seq
782 aa
AA seq
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MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSVDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYVEREKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKAYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCVSATESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKELGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatcatcaaattaactaccctctctggggtccaagaggagtctgctctttgc
tatcttctccaggttgatgagtttagatttttgttggactgtggctgggatgaacacttc
tccgtggacattattgattccctgaggaagcacgttcaccagatcgatgcagtgctcctg
tctcaccccgacccgctccacctcggggccctcccgttcgccgtggggaagctgggtctg
aactgcgccatctatgccacaattcctgtttataaaatgggccagatgttcatgtacgat
ctttatcagtctcgacacaatacagaagattttaccctctttacattggatgatgtggat
gcagcctttgataaaatacagcagctaaaattctctcagattgtgaacctgaaaggcaaa
ggacatggtttgtctatcacacccctgccagctggtcatatgataggaggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgccgttgacttcaaccacaagagg
gagatccacctgaatggatgttccctggaaatgctaagcaggccctctctacttatcaca
gattcatttaatgctacttatgtgcagccgagaaggaagcagagagatgagcagctcctg
accaacgtcctggaaactctccggggcgatgggaacgtgctgatagccgtggacacggca
ggccgggttctggagcttgctcagcttctcgaccagatctggagaactaaagacgcaggc
ttgggcgtgtactcgctggctctcctgaataacgtcagctacaacgtggtggagttctcg
aagtcacaggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaat
aacccatttcagttccgccacctctcgctgtgccatggcctttctgacctggctcgagtt
ccaagccccaaggttgtgcttgccagccagcctgacctggagtgtgggttctccagggac
ctctttatccagtggtgtcaggaccctaagaactcaatcattctaacttataggacaact
cctgggactttagcacgtttcttaattgataatccttctgagaaagttacagaaatcgag
ctgaggaaacgtgtgaagcttgaagggaaagaacttgaggaatatgtggaaagagaaaaa
ctaaagaaagaagcggctaagaaactggagcagtcgaaagaggcggacatcgactccagt
gacgagagtgacgtggaggaagacatcgaccagccgtcggctcacaagacaaagcatgac
ctgatgatgaagggggaaggtagccgcaaagggagcttctttaaacaggccaaaaaggcc
taccccatgtttcctgccccagaagaaagaattaaatgggacgagtatggagagatcatc
aaaccagaagatttcttagtaccagaacttcaggctactgaagaagaaaaaagcaaatta
gagtctggtttgacaaatggagaggaacccatggaccaggacctgtctgatgttcccacc
aagtgtgtttctgcaacagagtctattgagataaaagccagagttacttacatcgactat
gaaggacgctccgatggagactccattaaaaagatcatcaatcagatgaaaccacggcag
ctgatcattgtccacggtccaccagaggccagtcaggatctggccgagtgctgccgtgcg
tttggtgggaaagatattaaagtgtacatgccaaagctgcacgagacagtcgatgctacc
agtgagacgcacatctaccaggtaagattgaaagactcacttgtcagctccctgcagttc
tgtaaagctaaggatgccgagttagcgtggatagatggcgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggagaactcaaggacgatggagaagactct
gaaatgcaagtggatgctccttcagattctagtgtcatagcccagcagaaggccatgaaa
agtctgtttggagatgacgagaaagagttgggtgaggagagtgagatcatccccacactg
gagcctttgccgcctcacgaggttcctggacatcagtcagtttttatgaatgaaccgaga
ctgtctgacttcaagcaagttcttttgcgggaggggattcaagcggaatttgtagggggc
gtacttgtctgcaacaatcaagtagcagttcgcagaacggaaactggacgcatcgggcta
gaaggctgcctttgtcaagacttttataggatacgagaccttttatatgaacagtatgcc
attgtgtaa
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