Apodemus sylvaticus (European woodmouse): 127687236
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Entry
127687236 CDS
T10613
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04066
HIF-1 signaling pathway
asyl04137
Mitophagy - animal
asyl04140
Autophagy - animal
asyl04148
Efferocytosis
asyl04659
Th17 cell differentiation
asyl04919
Thyroid hormone signaling pathway
asyl05167
Kaposi sarcoma-associated herpesvirus infection
asyl05200
Pathways in cancer
asyl05205
Proteoglycans in cancer
asyl05208
Chemical carcinogenesis - reactive oxygen species
asyl05211
Renal cell carcinoma
asyl05230
Central carbon metabolism in cancer
asyl05231
Choline metabolism in cancer
asyl05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127687236 (Hif1a)
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Other DBs
NCBI-GeneID:
127687236
NCBI-ProteinID:
XP_052041621
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Position
6:complement(48506685..48550857)
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AA seq
827 aa
AA seq
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MEGAGGENEKKNRMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTES
VLKPVESSDMKMTQLFTKVESEDTSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSDDTE
SEDQQLEDVPLYNDVMFPSSNEKLNINLAMSPLPASETPKPLRSSADPALNQEVALKLES
SPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESNSPSPPSVSTVTGFQ
QTQLQKPTITAAATTTAATATTTNESKTVTKDNIEDIKILIASPASTQGPQETTTPKASA
YSGTHSRTASPDRVGKRVIEQTDKAHPRSLNLSVTLNQRNTVPEEELNPKTVALQNAQRK
RKMEHDGSLFQAAGIGTLLQQPGDCAPTTSLSWKRVKGCISSEQNGVEQKTIILIPSDLA
CRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgagaacgagaagaaaaataggatgagttctgaacgtcgaaaa
gaaaagtctagagatgcagcaagatctcggcgaagcaaagagtctgaagttttttatgag
cttgctcatcagttgccacttccccacaatgtgagctcacatcttgataaagcttctgtc
atgagactcaccatcagttacttacgtgtgagaaaacttctggatgctggtgatctagac
attgaagatgaaatgaaagcacagatgaactgcttttatctgaaagccctggatggcttt
gttatggtgctaacagatgatggtgacatgatttacatttccgataacgtgaacaaatat
atggggttaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgt
gaccatgaggaaatgagagaaatgcttacacacagaaatggcccagtgagaaaagggaaa
gagcaaaacacacagcggagcttttttctcagaatgaaatgtaccctgacaagccggggg
aggacgatgaacatcaagtcagcaacgtggaaggtgcttcactgcacaggccatattcat
gtctatgataccaacagtaaccaacctcagtgtgggtacaagaaaccacccatgacatgc
ttggtgctgatttgtgaacccattcctcatccgtcaaatattgaaattcctttagacagc
aagacatttctcagtcgacacagcctcgatatgaaattttcttactgtgatgaaagaatt
actgagttgatgggttatgagccagaagaacttttgggccgctcaatttatgaatattat
catgctttggactctgatcatctgaccaaaactcaccatgatatgtttactaaaggacaa
gtcaccacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaaact
caagctactgtcatatataatacgaagaactctcagccacagtgcattgtgtgtgtgaat
tatgttgtaagtggtattattcagcacgacttgattttctcccttcaacaaacagaatct
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctattcaccaaagttgaa
tcagaggatacaagctgcctttttgataagcttaagaaggagcctgatgctctcactctg
ctggctccagctgctggggacaccatcatatctctggattttggcagcgatgacacagaa
tctgaagatcaacaacttgaagatgttccattatataatgatgtaatgttcccctcttct
aatgaaaaattaaatataaatctggcaatgtccccattgcctgcctctgaaactccaaag
ccacttcgaagtagtgctgatcctgcactgaatcaagaggttgcattaaaattagagtcc
agtccagagtcactggaactttcttttaccatgcctcagattcaagatcagccagcaagt
ccttctgatggaagcactagacaaagttcacctgagcctaacagtcccagtgaatattgc
tttgatgtggatagtgatatggtcaatgtattcaagttggaactggtggaaaaactattt
gctgaagacacagaggcaaagaatccattttcaactcaggacactgatttagacttggag
atgttggctccctatattccaatggatgatgatttccagttacgttcctttgatcagttg
tcaccattagagagcaattctccaagccctccgagtgtgagcacagttacaggattccag
cagacccagttacagaaacctacaatcactgccgctgccaccacaactgccgctactgcc
accaccaccaatgaatcaaaaacagtgacaaaagacaatatagaagacattaaaatactg
attgcatctccagcttctacccaaggacctcaagaaacaaccactcctaaggcatcagca
tacagtggcactcacagtcggacagcctcaccagacagagtgggaaagagagtcatagaa
cagacagacaaagctcatccaaggagccttaacctgtctgtcactttgaatcaaagaaat
actgttcctgaggaagaattaaacccaaagacagtagctttgcagaatgctcagaggaag
cggaaaatggaacatgatggctccctttttcaagcagcaggaattggaacattattacag
cagccaggtgactgtgcacctactacgtcactttcttggaaacgagtgaaaggatgcata
tctagtgagcagaatggagtggagcaaaagacaattattttaataccctctgatttagca
tgtagactgctggggcaatcaatggatgagagtggattaccacagctgaccagttatgat
tgtgaagttaatgctcccatacaaggcagcaggaacctactgcagggtgaagaactactc
agagctttggatcaagttaactga
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