Apodemus sylvaticus (European woodmouse): 127687304
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Entry
127687304 CDS
T10613
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03013
Nucleocytoplasmic transport
asyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127687304 (Pnn)
03015 mRNA surveillance pathway
127687304 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127687304 (Pnn)
03041 Spliceosome [BR:
asyl03041
]
127687304 (Pnn)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127687304 (Pnn)
Spliceosome [BR:
asyl03041
]
Complex C
Other components
EJC/TREX
127687304 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
127687304
NCBI-ProteinID:
XP_052041762
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All DBs
Position
6:complement(63742508..63751060)
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AA seq
726 aa
AA seq
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MAVAVRALQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEAGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENINSLEVEKESEEKEEKEDKEPEPQPEPMAQPQ
PPPQPLPQSQPHSQPHSQPQPVLQSQPLCQPETLPLAVLQPPPQVVQEQGNLLPERKDFP
VESVKLPEVPVEPVLTVHSENKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSS
SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVD
RKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSD
RKDKRR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccgtgagagctttgcaggagcagctagaaaaggccaaagagagcctcaag
aatgtggacgagaatatccgcaagctcaccgggcgggacccgaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgaggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacttggaa
ggggcagtcagtaggctgggtggggagcgtcggacaagaagagaatcacgccaggaaagt
gacccagaagacgatgatgttaaaaagccagcactgcaatcttctgttgtagctacctcc
aaagaacgcacacgtagagaccttatccaggatcaaaacatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcaaaagtttaaacaagaatct
actgttgctactgaacggcaaaagagacgccaggaaattgaacaaaaacttgaagttcag
gctgaagaagagagaaagcaggttgaaaatgagaggagagaactatttgaggagagacgt
gctaaacagacagaactgcggcttctggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataacgctaagattattaagtacataagaaccaagacaaagccccat
ttattctatattcctggaagaatgtgtccagctacccaaaagctaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaggcaggagaggaagaggagaag
gaagcaggtatagttcatagcgatgcagaaaaagaacaggaggaggaggagcaaaagcag
gaaatggaggttaagatggaggaggagactgaggtaagagaaggtgagaagcagcaggat
agtcagccagaagaagttatggatgtgctagagatggttgaaagtgtcaaaaatgtaatt
gctgagcaggaagttatggaaacgaatcaagttgaaagtatagagccttcagaaaatgaa
actagcaaggaattggagccagagatggaatttgatgttgagccagataaagaatgtaaa
tctctttctcctggaaaagagaatattaattctctggaagtggaaaaggagtctgaggaa
aaagaggaaaaagaagataaagagcctgagccccaacctgagcctatggctcagcctcag
cccccacctcagcccctgccccagagccagccccactctcagccccactctcagccccag
cctgtactccagtcccagcctctctgtcagcctgagactttgccattagctgttttgcag
cctccacctcaggttgttcaggagcaggggaatctactacctgagcggaaggattttcct
gtagagtctgtaaaactccctgaggtgcctgtagagccagtcttgacagttcattcagag
aacaaaagcaaaaataagactaggagcagaagcagagggcgagcaaggaataaaaccagc
aagagtaggagtcgcagcagcagcagcagcagctccagtagcagctctactagtagcagc
agtgggagcagctccagcagtggcagcagtagtagtcgaagcagctccagtagcagctcc
agcacaagtgggagcagcagcagagacagcagcagcagcactagcagtagcagtgaaagt
aggagtcgcagtaggggccgaggacataaccgagatagaaagcacagaaggagcgtggac
cggaagcgaagggatacttcaggactagaaagaagtcacaagtcttcaaaaggtggtagt
agtagagatacaaaaggatcaaaggataagaattcccgatctgacagaaaaaggtctata
tcagagagtagtcgatcaggcaaaagatcgtcaagaagtgaaagagaccgaaaatcagac
aggaaagacaaaaggcgttaa
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integrated database retrieval system
