Apodemus sylvaticus (European woodmouse): 127687385
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Entry
127687385 CDS
T10613
Symbol
Hdac9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04613
Neutrophil extracellular trap formation
asyl05034
Alcoholism
asyl05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
127687385 (Hdac9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127687385 (Hdac9)
09165 Substance dependence
05034 Alcoholism
127687385 (Hdac9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127687385 (Hdac9)
Enzymes [BR:
asyl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127687385 (Hdac9)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
127687385 (Hdac9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
127687385
NCBI-ProteinID:
XP_052041897
LinkDB
All DBs
Position
6:88876848..89735821
Genome browser
AA seq
1129 aa
AA seq
DB search
MHGTMALSKKKLAQLQITAPREDGLKPTEEHLLHTNVSDGVAGREQFLAQQRMHSMINSV
DVKSEVPMGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAEF
QKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQLP
PLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVGRHPKLWYTAAHHTSL
DQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRR
KDGNLVTSFKKRVFEVAESSVSSSSPGSGPSSPNNGPAGNVTENEASVLPPTPLPEQLVP
QQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSPLNASNSLKDKQKCETQMLRQGVALP
GQYGSSIAASSSHVHGAMEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLAT
KERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNK
LLSKSIEQLKQPGNHLEEAEEELQGDQSMEDRATSKDSSTRSDSSACVEDTLGQVGAVKV
KEEPVDSDEDAQIQEMECGEQAAFMQQVSTLQLDPMPPLLDSSRTRTLSMHQARLATVGI
DGLEKHGLLSRAQSSPAASMSPHPAADCPRQPASATGIAYDPLMLKHQCICGNSTTHPEH
AGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKLDPRTL
LGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVV
RPPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSI
LYISLHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMP
VAREFDPDMVLVSAGFDALEGHTPPLGGYQVTAKCFGHLTKQLMTLANGRVALALEGGHD
LTAICDASEACINALLGNEPGPLEEDVLHQSVNTNAAASLQKTIEIQSKYWKSIKMVAVA
RGCALPASQLQEETETVSALASLTVDVEQPFVQEDGRTAGEPMEEEPAL
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcacaatggctctttctaaaaagaagctagcacagctacagatcacggctccg
agagaggacgggctgaagccaacggaagagcacctgctacacacgaatgtttcagatgga
gtggccggacgggagcagttcttggctcagcaaagaatgcacagtatgatcaactcagtg
gacgtgaaatcagaggttcctatgggcctggagcccatctcgcctttagacctaaggaca
gacctcaggatgatgatgcctgtggtggatcctgtcgtccgcgagaagcagctgcagcaa
gagttactccttatccagcagcagcagcagatccagaagcagctcctgatagcagagttt
cagaagcagcacgagaatttgacaaggcagcatcaagcacagctccaggagcacatcaag
ttacaacaggaacttctagccataaaacaacagcaagaactcctagaaaaggagcagaaa
ctggagcagcagaggcaagaacaggaagtagagaggcatcgcagagagcagcagcttcct
cctctcagaggcaaagatagaggacgagaaagggcagtggcaagcacagaagttaagcag
aagcttcaggaattcctgttgagtaaatcagcaacgaaagacactccaaccaatggaaaa
aatcattccgtgggccgccatcccaagctctggtacacggctgcccaccacacatcactg
gatcaaagctctccacccctcagtggaacgtctccatcctacaagtacacattaccagga
gcgcaagatgccaaggatgatttccccttgcggaaaactgcctcagagcccaacttgaag
gtgcggtccaggttaaaacagaaagtggcagagaggagaagcagccccttactcaggcgg
aaagacggaaaccttgtcacttcattcaagaagcgagtgtttgaggtggcagaatcctca
gtcagtagcagctctccagggtcaggtcccagttcaccaaacaatgggcctgctgggaat
gttaccgaaaacgaggcttcagttctgcctcccacgcctctccccgagcaactggttcca
caacagcgcattctaattcatgaagattccatgaacctgctaagtctctatacctcccct
tccctgcccaatatcactctgggacttccagcagtgccgtccccactcaatgcttccaat
tcactcaaagacaagcagaagtgtgagacacagatgctcagacaaggcgttgctctgcct
ggccagtatggcagtagcattgcagcatcctccagccatgttcatggagcaatggaagga
aagcccaacagcagccaccaggctctcctgcagcacctgctgttgaaggaacaaatgcgg
cagcaaaagcttcttgtggctggtggagttccattacatcctcagtctcctttggcaaca
aaagaaagaatttcaccaggcattagaggtacccacaaattgccccgccaccgacccctg
aatcgaacccagtctgcacctttgcctcagagcacgctggctcagctggtcattcagcag
cagcaccagcagttcctggagaagcagaaacagtaccagcaacagatccacatgaataaa
ctgctttcgaaatctattgaacaactgaagcaaccaggcaaccaccttgaagaagcagag
gaggagcttcagggggaccaatccatggaggacagagcgacctctaaggacagcagtact
aggagcgacagcagtgcatgtgtggaggacacactgggacaagttggggctgtgaaggtc
aaggaggagcccgtggacagcgatgaagatgctcagatacaggaaatggaatgtggggag
caggctgcttttatgcaacaggtatctactctgcagctggatcctatgcctcccttgctg
gattcctcgcgcacgcgcacactctccatgcaccaggctcgactggctacagttggcatc
gatggattagagaagcacggactcctctccagggcccagtcttctccagcggcttccatg
tcacctcacccagcagccgactgtccccgccagcctgcttctgccactggcattgcctat
gaccctctgatgctgaagcaccagtgcatctgtggcaattccaccacccaccctgagcac
gccgggcggatacagagcatctggtcacggctgcaagaaaccgggctgctaaataaatgt
gagcgaattcaaggtcgaaaagccagcctggaggagatacagcttgttcattctgaacat
cactcactgttgtatggcaccagccccctggacggacagaagctggaccccaggacactc
ttaggtgatgattctagaaaattcttctcctcgttaccttgtggtggacttggggtggac
agtgacaccatttggaatgagctgcactcgtccggtgctgcacgcatggctgttggctgt
gtcattgagctggcttccaaagtggcctcaggagagctgaagaatgggtttgctgttgtg
aggcccccaggccatcatgctgaagaatctgcagccatggggttctgcttttttaattca
gttgcaattaccgccaaatacttgagagaccaactaaatataagcaagatattgattgta
gatctggatgttcaccatggaaacggtacacagcaggccttttatgctgaccccagcatc
ctgtacatttcactccatcgctatgatgaagggaactttttccctggcagcggagccccg
aatgaggttggagtaggtctgggagaaggctacaatgtaaacattgcctggacagggggc
cttgacccccctatgggagatgttgagtaccttgaagctttcaggactgtcgtgatgcct
gtggccagagagtttgatccagacatggtcctggtttctgctggatttgatgcactggaa
ggccatacccctcccctagggggttaccaagtgacagcaaaatgctttggtcatttgacg
aagcaattgatgacattggctaatggacgtgtggcattggctcttgagggaggacatgat
ctgacagccatctgtgatgcatcggaagcctgcataaatgcccttctaggaaatgagcct
ggccctcttgaggaagatgttctccaccagtctgtgaatacaaacgcagctgcttcttta
cagaagaccattgaaatccaaagcaagtattggaagtccatcaagatggtggctgtcgcg
aggggttgtgctctgcctgcttctcagctgcaagaggagacagagaccgtttctgctcta
gcctccctgacggtagacgtggaacagccgtttgttcaggaagatggcagaactgctggt
gagcccatggaagaggagccggccttgtga
DBGET
integrated database retrieval system
