Apodemus sylvaticus (European woodmouse): 127687405
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Entry
127687405 CDS
T10613
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04151
PI3K-Akt signaling pathway
asyl04510
Focal adhesion
asyl04512
ECM-receptor interaction
asyl05145
Toxoplasmosis
asyl05146
Amoebiasis
asyl05165
Human papillomavirus infection
asyl05200
Pathways in cancer
asyl05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
127687405 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127687405 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127687405 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127687405 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
127687405 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
127687405 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
127687405 (Lamb1)
05145 Toxoplasmosis
127687405 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
CorA
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
127687405
NCBI-ProteinID:
XP_052041959
LinkDB
All DBs
Position
6:complement(92606166..92669298)
Genome browser
AA seq
1834 aa
AA seq
DB search
MERPLSPLPTFAFSPLYLSRKEDTKKRQAACLPRPPSRAASPRLQGLDMGLLQVFAFGVL
ALWSTRVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQE
DKKCFICDSRDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAEFH
FTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVDDIICDS
RYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRM
EIREKYYYAVYDMVVRGNCFCYGHASECAPVDGINEEVEGMVHGHCMCRHNTKGLNCELC
MDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGR
NCEQCRPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLYV
EGERCDVCKEGFYGLSAEDPYGCKSCACNPLGTIPGGSPCDSETGYCYCKRLVTGQRCDQ
CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTL
DHYIYEAEEANLGPGVVVVERQYIQDRIPSWTGPGFVRVPEGAYLEFFIDNIPYSMEYEI
LIRYEPQLPDHWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCF
EKGMNYTVRLELPQYTASGSDVESPYTLIDSLVLMPYCKSLDIFTVGGSGDGEVTNSAWE
TFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQC
QCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHVQGSVSAFCDAITGQCHCFQGIYARQCD
RCLPGYWGFPSCQPCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGD
HCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDACASGFFGNPSDFGGS
CQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQHGYYGDALRQDCRKCVCNY
LGTVKEHCNGSDCHCDKTTGQCSCLPNVVGQHCDRCAPNTWQLASGTGCGPCDCNAAHSF
GPACNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCV
CVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIGELTNRTHKLLEKAKALKISGV
IGPYRETVDSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLS
DTASRSNSTAGELDALQAEAASLDKTVKELAEQLEFIKNSDIQGALDSITKYFQISLEAE
KRVNASTTDPNSTVEQSALTRDRVEDLMLERESQFKEQQEEQARLLDELAGKLQSLDLSA
AAEMTCGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVL
SALAEVEQLSKMVSEAKVRADEAKQSAQDVLLKTNATKEKVGKSNEDLRNLIKQIRDFLT
EDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQSAADIARAE
LLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQGTQNLLTSIES
ETAASEETLTNASQRISKLERNVEELKRKAAQNSGEADYIEKVVYSVKQNADDVKKTLDG
ELDEKYKKVESLIAQKTGESADARRKAELLQNEAKTLLAQANSKLQLLEDLERKYEDNQK
YLEDKAQELVRLEGEVRSLLKDISEKVAVYSTCL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcccctctcccctctcccaacatttgccttttccccgctctacctctccaga
aaggaagacacgaagaaaagacaggcagcttgcctgccgcgtcctccttcccgtgctgcg
tcccctcggctgcaaggactggacatggggctgctccaggtgttcgcctttggtgtccta
gccctatggagcacccgagtgtgcgctcaggaaccggagttcagctatggttgtgcggaa
ggcagctgctaccctgccactggcgaccttctcatcggccgagcgcaaaagctctcagtg
acctccacatgcggactgcacaaaccagagccctactgtattgtcagccacctgcaggag
gacaagaaatgcttcatatgtgattcccgggatccttatcatgagaccctcaatcctgac
agccatctcattgaaaatgtggtcaccacgtttgctccaaaccgccttaaaatttggtgg
caatctgaaaatggtgtggagaatgtaactatccaactggacctggaagcagaattccac
ttcactcatctcatcatgacgttcaagacattccgtccagctgccatgctgatagagcgg
tcttctgactttgggaagacgtggggcgtgtacagatacttcgcctacgactgtgagagc
tcattcccgggcatttcaactggccccatgaagaaagtggatgacatcatctgtgactct
cgatattctgacattgaaccctcaacggaaggagaggtgatatttcgtgctttagatcct
gctttcaaaattgaagatccttacagtccaaggatacagaatctattaaaaatcaccaac
ttgagaatcaaatttgtgaaactgcacaccttgggagataaccttttggactccagaatg
gaaatcagagagaagtactattatgctgtctatgatatggtggttcgcgggaactgcttc
tgctacggccacgccagcgaatgcgcccccgtggatgggatcaacgaagaagtggaagga
atggttcatgggcactgcatgtgcagacacaacaccaaaggcttgaactgtgagctgtgc
atggatttctaccacgatttgccatggagacctgctgaaggccggaacagcaacgcctgc
aaaaagtgtaactgcaacgaacattccagctcttgtcactttgacatggcggtcttcctg
gctactggcaacgtcagcgggggagtgtgtgacaactgtcagcacaacaccatggggcgc
aactgtgagcagtgcaggccgttctacttccagcaccccgagagggacatccgggacccc
aatctctgcgaaccgtgtacctgtgacccagctggttctgagaacggaggaatctgtgat
ggttacactgatttttctgtgggtctcatcgctggtcagtgccggtgcaagttgtacgtg
gagggagagcgctgtgacgtttgtaaagaaggcttctacggcttaagtgctgaagacccg
tatggttgtaaatcatgtgcttgcaatcctctgggaacaattccgggtgggagtccttgt
gattctgagactggttactgctactgtaagcgcctggtgacaggacagcgctgtgaccaa
tgcctgccgcagcactggggtttaagcaacgatctggatggatgtcgaccttgtgactgt
gaccttggaggggccttgaacaatagctgctctgaggactccggccagtgctcctgcctg
ccccacatgattggacggcagtgtaacgaggtggagtccggctactacttcaccaccctg
gaccactacatctacgaagctgaggaagccaatctggggcctggagtcgttgtggtggaa
aggcagtacattcaggaccgcattccttcctggacaggacctggcttcgtccgagtgcct
gagggggcttatttggagtttttcattgacaacataccgtattccatggagtatgaaatc
ctcattcgctatgagccacagctgccggaccactgggagaaagctgtcatcactgtacag
cggccggggaagattccaaccagcagccgttgtggtaacactgttcccgatgatgacaac
caggtggtgtccttgtcacccggctcaagatacgtcgtcctccctcgccctgtgtgcttt
gagaagggaatgaactacacggttaggttggagctgccccagtatacggcctcgggcagt
gatgtggagagcccttacacactcattgactcacttgttctcatgccctactgcaaatcg
ctggacatcttcactgtcggaggctcaggagatggggaggtcaccaacagtgcctgggaa
accttccagcgctaccggtgtctggagaacagccggagtgtggtaaaaacacctatgaca
gatgtctgcagaaacatcatcttcagcatctctgccttgattcaccagacgggccttgct
tgtgaatgtgatcctcagggttctctgagttctgtgtgtgaccccaacggaggccagtgc
cagtgccgcccgaacgtggtcggaagaacctgcaaccggtgtgcccccggcaccttcggc
tttggccccaatggatgcaaaccctgtgactgccacgtacaagggtctgtcagtgccttc
tgtgatgccatcactggccagtgccactgtttccagggcatatatgctcggcagtgtgac
cgatgtctccccgggtattggggctttcccagctgccagccatgccagtgcaatggtcac
gctgaagactgtgacacagtgaccggggaatgcctgagctgtcaggactacaccacaggc
cacaactgcgaaaggtgcctggctggttactatggtgatcccatcattgggtcaggagac
cactgccgcccttgcccttgtcctgatggtcctgacagtggacgccagtttgccaggagc
tgttatcaagaccctgtcacgctccagcttgcatgtgtttgcgatcctgggtacattggc
tccagatgtgatgcctgtgcctctggattttttggcaatccctcagactttgggggttca
tgtcagccttgtcagtgtcaccacaacattgacactactgatccagaagcctgtgacaag
gagaccggaagatgcctcaagtgcctgtaccacacagaaggggaccactgccagctctgt
cagcatggctactacggtgatgctcttcgacaagactgtagaaagtgtgtctgcaattac
ctgggcaccgtgaaggagcactgtaatggctctgactgccattgtgacaaaaccactggt
cagtgctcgtgtctcccgaacgtggttgggcagcactgtgatcggtgtgcgcccaacacc
tggcagctggctagcgggactggctgcgggccatgcgattgcaatgctgcacattccttt
gggccagcctgcaatgagttcacagggcagtgccagtgcatgccgggctttggaggccga
acctgcagcgagtgccaggagctcttctggggagaccccgatgtggaatgccgagcctgt
gactgcgatcccagaggcattgagacaccacagtgtgaccagtccacaggccaatgtgtc
tgtgtggagggtgttgagggtcctcgctgtgacaagtgcaccagagggtactcaggggtc
ttccctgactgcacaccctgccaccagtgctttgctctctgggatgtgatcattggtgag
ctgaccaacaggacccacaaactcctggagaaagccaaggctttgaaaatcagtggtgtg
attggtccctaccgagagaccgtggactctgtggagaagaaagtcaatgagatcaaggac
atcctggcccagagcccagcagcagaacccctgaaaaacattggcattctcttcgaggag
gcagagaaattaaccaaagatgtcacagaaaagatggctcaagtagaagtgaaattatct
gatacagcttcacggagtaacagcacagctggagagctagatgcactgcaggcggaagca
gcgagccttgacaagaccgtgaaagagctggcagaacagctggaatttattaaaaactcc
gacattcagggtgccttggatagtatcaccaagtatttccagatctctcttgaggcagaa
aagagggtgaatgcttccaccacagaccccaacagcactgtggagcagtcagccctcacc
cgagacagggtagaagacctgatgttggagcgagagtctcagttcaaggagcagcaggag
gaacaggcacgccttctggatgaactggccggcaaactgcagagtctagacctatcagct
gcagcagagatgacctgcgggacgcctccaggggctgactgttctgagagtgaatgtggt
ggccccaactgcagaactgacgaaggagagaagaagtgtggggggcctggctgtggtggt
ctggtcactgtggcccatagtgcttggcagaaagccatggattttgaccgtgatgtcctg
agtgccctggctgaagtagaacagctctccaaaatggtctctgaagcaaaggtgagagca
gatgaggccaagcagagcgctcaggatgtcctgctgaagacaaatgctaccaaggagaag
gtgggcaagagcaacgaggacctgaggaacctcatcaagcagatcagagacttcctgact
gaggatagcgctgatctagacagtattgaagcagttgctaatgaagtactgaaaatggaa
atgcctagcacgccacagcagttacagaacctaacagaagacatccgggaacgagttgaa
accctttctcaagtagaggttattctgcagcagagtgcagctgacattgccagagctgag
ctattgcttgaagaagctaagagagcaagcaaaagtgcaacagatgttaaagtcactgca
gacatggtgaaggaagcattagaagaagcagaaaaggcccaggttgcagcagagaaggcg
attaaacaagctgatgaggatattcaaggaacccaaaacctgctaacatcgattgagtct
gaaacagcagcttccgaggaaaccctgaccaacgcctcccagcgcatcagcaagcttgag
aggaatgtggaagagcttaagcgaaaagctgcccagaactctggggaggcagactatatt
gaaaaagtagtatattctgtaaaacagaatgcagatgatgttaagaagactctagatggc
gagcttgatgaaaagtataagaaagtagaaagcttaattgcccaaaaaactggagagtca
gcagatgccaggaggaaagctgagctgctacaaaatgaagcaaaaacactcttggctcaa
gccaacagcaaactgcagctgttggaagacttagaaaggaaatatgaggacaatcaaaaa
tacttagaagacaaagctcaagaactggtgcgactggagggtgaggtccgctccctcctt
aaggacataagtgagaaagtcgccgtttacagcacctgcttgtaa
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integrated database retrieval system
