Apodemus sylvaticus (European woodmouse): 127687551
Help
Entry
127687551 CDS
T10613
Symbol
Spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127687551 (Spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asyl04812
]
127687551 (Spast)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
127687551 (Spast)
Membrane trafficking [BR:
asyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
127687551 (Spast)
Cytoskeleton proteins [BR:
asyl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127687551 (Spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
MIT
AAA_14
Mg_chelatase
DUF815
IstB_IS21
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
Motif
Other DBs
NCBI-GeneID:
127687551
NCBI-ProteinID:
XP_052042250
LinkDB
All DBs
Position
6:complement(116170332..116220620)
Genome browser
AA seq
614 aa
AA seq
DB search
MSSPAGRRKKKGSGGASPAPARPPPPAAVPAPAAGPAPAPGSPHKRNLYYFSYPLVVGFA
LLRLLACHLGLLFAWLCQRFSRALMAAKRSSGAAPAPASPSPPAPGPGGEAESVRVFHKQ
AFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVLVTGQGEQYERARRLQAKMM
TNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLTHA
SNSLPRSKTVMKSGSAGLSGHHRAPSCSGLSMVSGARPAPGAAAPTHKGTPKPNRTNKPS
TPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPS
LRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL
VRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLV
MGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTD
GYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLE
AYIRWNKDFGDTTV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccggccggacgacggaagaagaaaggctcaggcggcgcgagcccggcgccc
gccaggcctccgccccccgccgcggtccccgcccctgccgccggcccggcccctgcgccc
ggctcgccgcataagcggaacctgtattacttctcgtacccgctggtcgtcggcttcgcc
ctgctgcgcctgctggcctgccacctggggctcctcttcgcgtggctctgccagcgcttc
tcccgcgccctcatggccgccaagaggagctccggggccgcgccggcacccgcctcgccc
tcacccccagcgcccggaccgggtggcgaggccgagagcgtccgcgtcttccacaagcag
gccttcgagtacatctccattgccctacgcatcgacgaggaagagaaagcaggacagaag
gaacaagctgtggaatggtataagaaaggtatcgaagaactagaaaaaggaattgcggtt
ctagttaccggccaaggtgaacagtatgaaagagctagacgccttcaagccaaaatgatg
actaatttagttatggccaaggaccgtttacaacttctagagaagctgcaaccagttttg
cagttttccaagtcacaaacggacgtctataatgagagtactaacctgacatgccgcaac
ggacatctccagtcagaaagtggagcagttccaaagaggaaagaccccttaacacatgct
agtaattcattgcctcgatcaaaaactgtcatgaaaagtggatccgcagggctttctggt
caccacagggcgcctagttgcagtggcttatccatggtttctggagcaagaccagcacct
ggtgctgcagctcccacacataagggtactccaaaaccaaatagaaccaacaaaccttct
acacccacaactgcagttcggaaaaagaaagatttgaaaaattttaggaatgtggacagc
aatcttgctaacctcataatgaatgaaattgttgacaatgggacagctgttaaatttgat
gatatagctggccaggacctggcaaagcaagcgctgcaagagattgtcattcttccttcc
ctgcggcctgagttgttcacagggctcagagctcccgctagaggcttgctgctcttcggc
cctccagggaacgggaaaacaatgctggctaaagcagtagctgcagaatctaatgcgacc
tttttcaatataagtgctgcaagtttaacttcaaaatatgtgggagaaggagagaaattg
gtgagagctctttttgctgtggctcgagaacttcaaccatctataatttttatagatgaa
gttgatagtcttttgtgtgaaagaagagaaggggagcatgatgctagtagacgactaaaa
acagaatttttaatcgaattcgatggggtgcagtctgctggagatgacagagtactcgta
atgggtgcgactaacaggccccaagagcttgatgaagctgttctcaggcgtttcattaaa
cgggtatatgtgtcgttaccaaatgaggagacaagactacttctacttaaaaacctgtta
tgtaaacaaggaagtccactgacccagaaagaacttgcacagctcgctagaatgactgat
ggatactctggaagtgatctgacagctttggcgaaggatgcagccctgggtcctatccga
gaactgaaaccagagcaggtgaagaatatgtctgccagtgagatgagaaatattcgacta
tctgacttcacagaatccttaaaaaagataaaacgcagtgtgagtcctcagaccttagaa
gcatacatacgctggaacaaggactttggagacaccaccgtttaa
DBGET
integrated database retrieval system
