Apodemus sylvaticus (European woodmouse): 127687636
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Entry
127687636 CDS
T10613
Symbol
Dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
asyl03012
]
127687636 (Dhx57)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127687636 (Dhx57)
Translation factors [BR:
asyl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127687636 (Dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
RWD
Helicase_C
DEAD
HA2_C
HA2_N
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
nSTAND3
AAA_22
UBA
AAA_19
AAA_14
zf-CCCH_2
NB-ARC
NPHP3_N
ResIII
ATPase_2
GyrB_insert
Motif
Other DBs
NCBI-GeneID:
127687636
NCBI-ProteinID:
XP_052042408
LinkDB
All DBs
Position
6:complement(128070464..128120535)
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AA seq
1387 aa
AA seq
DB search
MSSSVRRKGKPGKGDGKGSSRGGRGGKGHMNKSHGGGGGGGGGCGGGGGSRKASNRIWDD
GDDFCVFTESKRPSRPCDSNKSKGETRPKWKPKAKVPLQTLHMTSENQEKVKALLRDLQE
QGADAGSERGTSGEEEDDETERAEEQCWPAGQEPIFLPDSSPWEYIGPEEVEPPIPEFAV
SPLAVQKLSRYGFHTEHCQLALRICDGDLGAALEHLLHQCFSEMFGERMALSEAAVYVSL
SECVEQRQEEALALKSICGEKFIERIQNRVWTIGLELEYLTNKFCKSKQKERSKNARDTS
PETCKFYLKGNCKFGSKCKFKHEVPPHQIIGRAERNVDDSHLDADDDTSFVYELQIRFSK
DHKYPYQAPLVAFCSTNENLPLACRLHISEFLYGKALEFAKTSEPVVYSLITLLEEESEI
VKLLTHTQHKYSVPPVAVPPGPSETRISKPAYRRPVIPSNTFLSNQMLEGERLSELEEDA
DADEGPAPIIVENESYVNLKKRSYKKYDRPSKSLFAENSKICRQFQMKQASRQFHAILQE
RQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQ
PRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQ
GVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITI
PGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQIAKEKLKARHNRTALEEVEEDLRLS
LHLQDEEESVKDTIPDQQLDFKQLLIRYKGVSKSVIKTMSVMDFEKVNLELIEALLEWIV
DGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVF
AKPPIGVTKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANAL
QRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQS
VFSRLLEPPHIDSLRASKVRLRDLGALTADEKLTPLGYHLASLPVDVRIGKLMLLGSIFR
CLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESA
RASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKEGLRAKEIEKRAQGGDGVLDAT
GEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTSSGVVRLQPKSAELKFVTKND
GYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQR
GAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSMDLCTCPRGSRIISMI
VKLITTQ
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcagtaagaagaaaaggcaagccaggcaaaggggatggaaagggatcttct
agaggaggaagaggaggcaaaggtcacatgaataaatctcatgggggtggaggtggtggc
ggcggtggctgcggcggtggcggtggcagtagaaaggcctcaaatagaatttgggatgat
ggcgatgacttttgtgtcttcactgaatccaagcgcccgtccaggccctgcgacagtaac
aaaagcaaaggagagacacggcctaagtggaagcccaaagccaaagtgcccctccagacg
ctgcacatgacatcagagaatcaggagaaggtgaaagccctcctgagggacctgcaggaa
cagggtgcggacgcgggatccgaaagaggcacctctggggaggaggaagacgacgagacg
gagcgtgctgaggagcagtgctggccagctgggcaggagcctatcttccttcctgattcc
agtccttgggaatatataggcccagaagaagtggagcctcctattccagaatttgcagtc
tcgccattggcagtgcaaaaactttccaggtatggcttccacactgagcactgtcagctg
gccctgaggatctgtgatggagacttaggggcggcactggagcatcttctccaccagtgt
ttctcggagatgtttggagagaggatggcgctctccgaggcagctgtttatgtcagcctg
agtgagtgtgtggagcagagacaggaagaggcgcttgctctcaagtccatctgtggagaa
aaatttatagaaaggattcagaacagagtctggaccattgggttggaactggaatatttg
acaaacaaattctgcaagtctaagcaaaaggagaggagcaaaaatgcacgggacacttca
cctgagacctgtaaattttacctcaaaggaaattgtaaatttggatcaaaatgcaaattc
aaacatgaagtgcccccacatcaaatcattgggagagcagagagaaacgtagatgactct
catcttgatgctgatgacgacacgagttttgtgtatgagcttcagatacgcttttctaaa
gaccacaaatacccctaccaagctcccttggtggcattctgttccaccaatgagaaccta
cctctggcttgtcgtttacatatttctgagttcctttatggcaaggccttggaatttgca
aaaacttcagaacctgttgtatattctttgataacccttttagaggaagagtctgagatt
gtcaagttactaacgcacactcaacataagtatagtgttcctcctgtggccgtccctcca
ggaccttccgagaccaggataagtaaacctgcttaccgcaggccagtcatcccgagtaac
actttcctttctaatcaaatgctagaaggggaaaggttatcagaactggaggaggatgcg
gatgcggatgagggacccgcaccgataatcgtggagaacgagagctatgtgaacctgaag
aaacggagttacaaaaaatatgaccggccatcaaagtccctgtttgctgagaacagtaag
atctgcaggcagttccagatgaaacaggcttccagacagttccacgcaattctgcaagaa
agacagttactacctgcttgggaagaaagagaaaccattcttaaactgttgagcaagcac
caagtggttgtcataagtggtatgactggatgtgggaaaaccacacagattccacagttt
attctggataactctctgaatgggccacctgagagggtggcaaacatcatctgtacccaa
ccccgacgaatctctgcaatctctgttgctgaacgtgttgctaaagaaagagcagaaagg
gtgggtctgaccgtgggataccagattcggttggaaagtgtcaagtcctcagccaccaga
ctgttatactgcaccacaggagtgctgctgaggaggctagaaggagatgcgaccttgcag
ggggtcacccacatcattgttgatgaagttcatgagaggacggaagaaagtgacttctta
ctgctagttttgaaggacattgtgatgcagagagccaccctccaggtcattctgatgagt
gcgactctggacgctgggctcttctccaagtatttcagctactgcccagtcatcaccata
ccaggtcgtgcatttcctgttgatcaattttttctggaggatgcacttgctgtgacgagg
tatgtgttacaggacgggagcccatatatgcgttccatgaaacagattgcaaaggaaaag
cttaaagccaggcacaacagaaccgcactggaggaggtagaggaagacctgaggctgtcc
cttcatctccaggatgaggaggagtctgtcaaagatacgatacctgatcagcagttagat
ttcaagcagctcttgatccgttataaaggggtgagcaagtcagtcatcaagacaatgtct
gtgatggattttgaaaaggtcaaccttgaattaatagaggccttgttagagtggattgta
gacggcaagcactcctaccccccaggtgctatacttgtgttcttaccagggctagcagaa
atcaagatgctttacgagcagctacagtctaactctcttttcaacaacagacgcagtcac
cggtgtgtcattcacccgctccactcctccttgtccagtgaagagcagcaggcggtattt
gcgaaacctcccatcggtgtaaccaagattatcatttccaccaacattgctgagacatcc
gtaaccattgatgatgttgtttatgtcattgattctgggaagatgaaagaaaagagatac
gacgctggcaaaggaatggaaagtctagaggacacattcgtgtctcaggccaacgctctg
cagagaaaaggccgagctggccgagttgcatctggagtctgtttccatttgttcacgagc
caccactacaaccaccagcttctgaagcagcagctcccagaaatccaaagagtgcccctg
gaacagctgtgcctcagaattaaaattttagaaatgtttagtactcataatctccagtct
gtgttctctcggctccttgaacctccacatattgattctctgcgtgcctcaaaagtgcgg
ttgcgagacttgggggccttgactgcagatgaaaagctgactcctctgggttaccacttg
gcctctctgccggtggacgtgaggatcggcaaactgatgctgttaggatccatcttccgc
tgcctggaccctgctctcaccattgctgccagcttggctttcaagtccccttttgtgtct
ccctgggataaaaaagaagaggctaatcagaaaaagctggaatttgcatttgcaaacagt
gattacctggctcttctatgcgcatataagggttggcagctgagtacaaaagaaagcgca
cgagcaagttacaattactgcagacagaatttcctgtctgggagaaccctgcaagaaatg
gccagcctcaaacggcagttcactgagctgctgtccgacatagggtttgtaaaagaagga
ctccgcgcaaaagaaattgaaaaaagagcccaaggaggagatggcgtcctggatgccaca
ggagaggaggctaacacgaatgctgagaaccccaagctgatatcagcagtgctgtgtgcc
gctctgtatccaaatgtagtgcaggtcaagaccccagaaggaaagttccagaagaccagt
tctggagtcgtcagactgcagccaaagtcagctgagctgaagtttgttaccaagaatgat
ggatacgtccacattcacccttcctcggtgaactatcaggtcagacacttcgacagcccc
tacctgttgtaccatgagaaaatcaaaaccagccgggtgtttatccgagactgcagcatg
gtgtctgtgtaccccctggtcttgtttggagggggccaagtaaacgtgcagcttcaaaga
ggggcgttcgtggtctccctggacgatggctggatccgctttgtggctgcctcccatcag
gtggccgaactggtgaaggaactccgctgcgagcttgaccagctcctccaggataaaatt
aaaaacccgagcatggacctgtgtacctgtcccagaggctctcggatcatcagcatgatt
gtgaagctcatcaccacacagtga
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