Apodemus sylvaticus (European woodmouse): 127687691
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Entry
127687691 CDS
T10613
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl01524
Platinum drug resistance
asyl03430
Mismatch repair
asyl05200
Pathways in cancer
asyl05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127687691 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127687691 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
127687691 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
127687691 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127687691 (Msh2)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127687691 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
127687691
NCBI-ProteinID:
XP_052042533
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Position
6:135761606..135818512
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AA seq
933 aa
AA seq
DB search
MAVQPKETLQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVMGVKMSMVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETTGDMGKLRQVIQRGGILITERKRAEFSTKDIYQD
LNRLLKSKKGEQINSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELAAFDFSQYM
KLDTAAVRALNLFQGSVEDTSGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERL
NLVEAFVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPNVIQA
LEKYQGRHQPLLLAIFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LRKVMDGLEKKMQSTLISAARGLGLDAGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
HLDAVVSFAHVSNAAPVPYVRPVILDRGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVRKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQSIGTSLGCDYSEPAAKRRCLEREQGEKIILEFLSKVKQVPFPDMS
EESISAKLRQLKAEVVAKNNSFVNEIIARIKAP
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcctaaggagacgctgcagttggagggcgcggccgaggcgggcttcgtg
cgcttctttgaaggcatgccggagaagccgagcaccacggtgcgcctcttcgaccgcggc
gacttttacaccgcgcacggcgaggacgcgctgctggcggcccgcgaggtgttcaagacc
cagggcgtgatcaagtacatggggccggcaggggccaagacactgcagagtgttgtgctt
agcaaaatgaattttgagtcttttgtgaaagatcttcttctggttcgtcagtatcgagtt
gaagtttataagaataaagctgggaacaaggcatcaaaggagaacgactggtacttggca
tttaaggcttctcccggcaatctttctcagtttgaagacatcctgtttggtaacaatgac
atgtcagcttccattggcgtcatgggtgttaagatgtccatggtcgatggtcaaagacag
gttggagttgggtatgtggactccatccagagaaagctaggactgtgcgagttccccgat
aatgatcagttctccaatctcgaggctcttctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactactggagacatggggaaactgaggcaggttatccagagagga
gggattctgatcacagaaagaaagagagccgagttttccactaaagacatttatcaggat
ctcaaccggttattgaaaagcaaaaaaggagagcagataaatagcgctgtcttaccagag
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaattttggacagtttgaactggctgcttttgacttcagccagtacatg
aagttggacacggcagcagtcagagccctcaaccttttccagggttctgttgaagacacc
tctggctctcagtctctggctgcattattgaataaatgcaaaactgctcaaggacaaaga
ttggtcaaccagtggatcaagcagccgctcatggataggaacaggatagaagagaggtta
aatttagtggaagcttttgtcgaagattcagaattgaggcagagtttacaagaggattta
cttcgccgatttccagatcttaaccggcttgccaagaaatttcagaggcaagcagcaaat
ttacaagattgttaccgactgtatcagggtgtgaaccaactccccaacgtcatccaggct
ctggagaaataccaaggaagacaccagccattgttgttggcaatttttgtgactcctctt
attgatcttcgttctgacttttcaaaatttcaagaaatgatagaaacgactttagatatg
gatcaggtggaaaaccacgagttccttgtaaaaccttcatttgatcctaacctgagtgaa
ctaagaaaagtcatggatggcctggaaaagaagatgcagtccaccttgataagcgcggcc
cggggtctcggattggacgctggcaaacagattaaattggactccagtgcacagtttgga
tattattttcgtgtaacctgcaaggaagagaaagtccttcgtaacaacaagaacttcagc
acagtggacatccagaagaatggcgttaaattcaccaacagtgaattgtcctcattaaat
gaagaatatactaaaaacaaaggcgagtatgaggaggcccaggacgccattgttaaagaa
attgtcaatatttcctcaggctatgtagaaccaatgcagacgctcaacgatgtgctagct
cacttggatgctgtcgtcagtttcgctcacgtgtccaatgcagctcctgtcccctatgta
cggccagtcatcttggacagaggaaagggaaggattatactgaaagcctccaggcacgct
tgtgttgaagttcaagacgaagttgcatttattccaaatgatgtgcactttgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatacattcgt
cagactggggtgattgtactcatggcccaaattgggtgttttgtgccctgtgagtcagca
gaggtgtccattgtggattgcatcttggctcgagtcggggctggtgacagtcaactgaaa
ggcgtctccacattcatggctgaaatgctggagactgcttctatcctcaggtcagcaacc
aaagattccttaataatcattgatgaactgggaagaggaacctctacctacgatggattt
gggttagcatgggctatatcagattacattgcaaccaagatcggtgccttttgcatgttt
gccacccattttcatgaacttaccgctttggccaatcaaataccaactgttaacaatcta
cacgtcacggcgctaaccactgaagagaccctaacgatgctttaccaagtgagaaaaggt
gtctgtgatcagagtttcggtattcacgtggctgagctcgctaatttccctaggcacgtg
atagagtgtgccaagcagaaagctctggagcttgaggagtttcagagcatcggaacctca
ctgggatgtgattactccgagccagctgctaagaggcggtgcctggagagagagcaaggt
gagaagattattctggagttcctgtccaaggtcaagcaggtgcccttccccgacatgtct
gaggagagcatctcggcgaagctgaggcagctgaaagctgaggtggtcgcaaagaataac
agtttcgtgaatgaaatcattgcacggataaaggctccgtga
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