Apodemus sylvaticus (European woodmouse): 127687694
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Entry
127687694 CDS
T10613
Symbol
Msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl01524
Platinum drug resistance
asyl03430
Mismatch repair
asyl05200
Pathways in cancer
asyl05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127687694 (Msh6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127687694 (Msh6)
09162 Cancer: specific types
05210 Colorectal cancer
127687694 (Msh6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
127687694 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127687694 (Msh6)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127687694 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
127687694
NCBI-ProteinID:
XP_052042537
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Position
6:136072889..136091250
Genome browser
AA seq
1354 aa
AA seq
DB search
MSRQSTLYSFFPKSPAVGDTKDAAAGASRKGAAASRSSASRGRDAAWSRPGSRPAAVSAS
SPEAKDLNGGAQRPAAPTVPPSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIRKKG
KSVRVHVQFFDDSPTRGWVSNRMLKPYTGSKSKEAQKGGHFYSSKSEILRAMQRADEALS
KDKVERLKLAVCDEPSEPEEEEETEVHEAYLSDKNEEDNQNESGEEAQPNVQGPRRSSRQ
VKKRRVISDSESDIGGSDVEFKPDTKQEASSDEVSSGVGDSDSEGLSTFAKGAPKRKRAV
AAHGGLKRKSMKKETGSAKQATRLLSETKSTLSAFSAPQNSESQTHISGGGNSSSGPTIW
YHETLDWLKPDKRRDEHRRRPDHPDFNSSTLYVPEDFLNSCTPGMRKWWQFKSQNFDLVI
FYKVGKFYELYHMDAVIGVNELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQ
TETPEMMEARCRKMAQVSKFDRVVRREICRIITKGTQTYSVLDGDPSENYSRYLLSFKEK
EEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLSTET
KTVLKGSLSSCLQEGLIPGSQFWDASKTLRTLLEGGYFTGNEDSSTVLPPVLKGMTSESD
SIGLTPGEDSELALSALGGCVYYLKKCLIDQELLSMANFEEYFPLDSDMVSTVKPGAVFT
KASQRMVLDAVTLNNLEIFLNGTNGSIEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSA
ISDRLDAVEDLMAVPDKVTEVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEE
TTYSKKKIIDFLSALEGFKVMCKITELMEDVADGFKSKILKQVVTLQTKSPKGRFPDLTT
ELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRIGCKSI
VYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLSNLINAEERRDT
SLKDCMRRLFYNFDKNYKDWHSAVECIAVLDVLLCLANYSQGGDGPMCRPVILFPGEDTH
PFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEAEENGKAYCVLVTGPNMGGKSTLIRQ
AGLLAVMAQMGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATA
HSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKNAYVRLGH
MACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERM
NQSLQLFREICLASERPTINGEAIHRLLALINGL
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacaaagcaccctttacagcttcttccccaagtccccggcggtcggcgacacc
aaggacgccgcagctggggcctcacgcaaaggtgccgccgcctcccgatcctctgcttcc
cgcggcagggatgcggcctggagcagacctggatctcggcccgcggcggtatccgcctcg
tcgccagaggcaaaggatctcaacggaggggcgcagaggccagccgcgccgaccgtgccc
cccagttcttgtgacttctcaccaggtgatttggtttgggctaagatggaaggttacccc
tggtggccttgcctggtttataatcatccctttgatggaacattcatcaggaagaaaggg
aaatctgttcgtgttcatgtacagttttttgatgacagtccaacaaggggctgggttagc
aatcggatgttaaagccatatacaggttcaaagtcaaaggaagcccagaagggaggtcat
ttctacagttcaaagtctgaaatactcagagcaatgcagcgtgcagatgaggccttaagt
aaggacaaggttgagaggcttaagctggcagtgtgtgatgagccttcagagccagaagag
gaggaagagacagaggtgcatgaggcttatttatctgataagaatgaagaggacaatcaa
aacgaaagtggagaagaggcacagcctaacgttcaggggcctaggcgaagtagccggcaa
gtcaaaaagcgaagggttatctccgactctgagagtgacattggtggttctgatgtagag
tttaagccagacactaaacaagaagccagcagtgacgaagtgagcagtggagttggggac
agcgatagtgaaggcctaagcacctttgccaaaggtgccccaaagcggaagagagccgtg
gctgctcatggtggacttaaaaggaaaagtatgaagaaggaaacaggctcagccaaacag
gcaactcgtcttctgtcagaaaccaagagcaccttgagtgctttttctgcccctcagaat
tctgaatcccaaacccacatcagtggaggaggtaacagcagcagtggacccactatttgg
tatcacgaaactttagattggctcaagccagacaagagaagagatgagcacaggagacgg
cccgatcaccctgattttaattcttccacactgtatgtgcctgaagacttcctcaactct
tgtactccagggatgaggaagtggtggcagttcaagtctcagaactttgatcttgtcatc
ttttataaggtggggaagttttatgaattgtatcacatggatgctgttattggagtcaat
gagctgggactgatattcatgaaaggcaactgggcccattctggttttccagagattgca
tttggccgattctcggattccttggtgcagaagggctataaggtagcacgagtggaacag
actgagactccagaaatgatggaggcccgatgccgcaagatggcacaagtatctaagttt
gatagagtggtgagaagggagatttgtaggatcatcaccaagggcacacagacctatagt
gtgctggatggtgatccctctgagaactacagtaggtatcttcttagcttcaaagagaag
gaggaagactcttctggtcacacacgtgtatatggtgtctgctttgttgacacttcactg
ggcaagtttttcataggccagttttcggatgatcgccactgttccagatttaggactcta
gtggcacactatcctccagtacaaattttgtttgagaaaggaaacctctcaacagaaacc
aaaaccgtcctgaagggttcactgtcatcttgtcttcaggaaggtctcataccaggctcc
caattttgggatgccagtaagactttgcgaacactccttgaaggagggtattttactgga
aatgaagatagtagtacagtgttgcctccagtgcttaaaggtatgacctcggagtcagat
tctattgggttgacaccaggagaagacagtgaactggctctctctgctctaggcggttgt
gtttactacctcaaaaaatgcttgattgatcaggagcttctgtcaatggctaattttgaa
gagtatttccccttggattctgacatggtcagcacagtaaagcctggtgctgtctttact
aaagccagtcagcgaatggtgctagacgcagtgacattaaacaacctggagattttcttg
aatgggacaaatggctctattgaagggactctgctagagaggctggatacttgccatacc
ccctttggcaagcggctcttaaaacagtggctttgtgcccccctctgtagcccttctgct
atcagtgaccgtttagatgctgtagaagatctgatggctgtgcctgacaaagtcaccgaa
gttgcagacctactaaagaagctaccggatcttgagaggctgctgagtaaaattcataat
gttgggtctcccctaaagagccagaaccatccagatagcagggctataatgtacgaagaa
acgacatacagcaaaaagaagatcattgattttctctctgctctagaaggattcaaagta
atgtgtaagattacagagcttatggaggatgtcgctgatggctttaagtctaagatcctt
aagcaggttgttactctacagacaaaaagtcctaaaggccgctttcctgatctgactaca
gaactgaaccgatgggatacagcttttgaccatgagaaggctcgaaagactggacttatt
actccaaaagcagggtttgactcagattatgaccaagcacttgctgatataagagagaat
gaacaaagcctcctggagtacttagacaaacagcgcagtcggattggctgtaagagcata
gtctactggggaattggtaggaaccgctaccagttagagattccagagaattttgctacg
cgtaatctacctgaagaatatgagttgaaatctactaaaaagggctgtaaacgatactgg
accaaaacaattgagaagaaattatctaatcttataaatgctgaagaacgtagagacaca
tctctaaaggactgcatgcgacgtttgttctataactttgataaaaattacaaggactgg
cattctgctgtagagtgcattgcagtgttggatgttttactgtgcctggctaactatagt
caaggaggagatggtcctatgtgtcgtccagtaattctgtttccaggagaagacacgcat
cccttcttagagcttaaagggtcccgacatccctgcattacaaagaccttttttggagat
gattttattcctaatgacattctaataggctgtgaggaagaagcagaggaaaatggtaaa
gcctattgtgtgcttgtgacaggaccaaatatgggaggcaaatctacactcataagacag
gctggtctgttagctgtaatggcccagatgggttgttatgtgcctgctgagaagtgtagg
ctcacaccagttgatagagtgtttactagacttggtgcctcagatagaataatgtcaggg
gaaagtacattttttgttgagttgagtgaaactgctagcatacttaggcacgctacagca
cattctttggtacttgtggatgaattaggaagaggtactgcaacttttgatgggacagcg
atagccaatgcagttgttaaagaacttgctgaaaccataaagtgtcgaacactgttttct
acacattatcattcattagttgaagattattctaaaaatgcttatgtgcgcctagggcat
atggcatgcatggtagaaaatgaatgtgaggatcccagccaggagactattactttcctc
tataaattcatcaagggagcttgtcctaagagctatggcttcaatgcagcaaggcttgct
aatcttccagaggaagttattcagaaaggacacagaaaagcaagagaatttgagaggatg
aatcagtcattacaactatttcgggaaatttgtctggctagtgaaaggccaactataaac
ggtgaagctatccatagattgctggctttgattaacggattgtag
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integrated database retrieval system
