Apodemus sylvaticus (European woodmouse): 127687704
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Entry
127687704 CDS
T10613
Symbol
Nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127687704 (Nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127687704 (Nrxn1)
Membrane trafficking [BR:
asyl04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
127687704 (Nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
127687704
NCBI-ProteinID:
XP_052042553
LinkDB
All DBs
Position
6:complement(138377333..139535985)
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AA seq
1515 aa
AA seq
DB search
MGTALVQRGGCCLLCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHSVRIR
RQFRNTTLYIDHTEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGGSPCEAGDEGEGGVCLNGGVCSVVDD
QAVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQN
PIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVN
GKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDD
FFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFK
CENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKH
PQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN
TLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQ
SKDIRQMAEIQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSC
EREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELD
AGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMT
GQMAGDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCE
LNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDF
IVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ
ITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFC
NGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG
GQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFN
VGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQ
RIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYNGLKVLNMAA
ENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEMSTSIMETTTTLATSTARRGKPPTKE
PISQTTDDILVASAECPSDDEDIDPCEPSSGGLANPTRVGGREPYPGSAEVIRESSSTTG
MVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPSSAK
SANKNKKNKDKEYYV
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcgctggtccagcgcgggggctgctgtctcctctgcctgtcgctgctgctg
ctgggctgctgggcagagctgggcagcgggctggagttcccaggcgccgagggccagtgg
acacgcttccccaagtggaacgcgtgctgcgagagcgagatgagcttccaactgaagacg
cgcagcgcccgcggcctcgtgctctacttcgacgacgagggcttctgcgacttcctcgag
ctcatcctgacacgcggtggccgcctgcagctcagcttctccatcttctgcgccgagccc
gccactctgttggctgacacgcccgtcaacgatggcgcctggcacagcgtgcgcatccgc
cgccagttccgcaacaccacgctctacatcgaccacaccgaggccaagtgggtggaggtc
aagtccaagcgcagggacatgacggtgttcagcgggctcttcgtgggcggcctgcctccg
gaactgcgtgctgcagcgctcaagctcacgctggcctcagtgcgcgagcgcgagcccttc
aagggctggatccgcgacgtcagggtcaactcctcgcaggcgctgccggtggacagcggc
gaggtcaagctggacgacgagccgcccaacagcggcggcggtgggagtccgtgcgaggca
ggtgacgaaggcgagggcggtgtgtgcctcaacgggggagtgtgctccgtggtggacgac
caggccgtgtgcgactgctcgaggaccggcttccgtggcaaggactgcagccaagaagac
aacaatgtggaaggtctggcgcacctgatgatgggcgaccaaggtaaaagtaaaggaaaa
gaagagtacattgctacattcaagggatctgaatacttctgctacgacttatctcaaaac
cccattcaaagcagcagcgatgaaataactctgtcctttaaaactcttcagaggaacgga
ctgatgcttcacacagggaaatcagctgattatgtcaatcttgccttgaaaaatggagct
gtatctctggtcattaatttgggatcaggggcctttgaagcgctagtggagcctgtgaat
ggaaagtttaatgataatgcctggcatgatgtgaaagtcaccaggaatctgcgtcagcac
tcaggcattggacacgctatggtaaacaaactacattgttcggtgacaatatcagtggat
gggattcttaccacaacgggctacacacaagaagattacaccatgctggggtctgatgac
tttttctatgttggaggcagccccagcacagccgaccttccagggtcaccagtcagtaac
aactttatgggctgtctcaaagaggttgtatataaaaataatgatgtaaggctggagtta
tcacgacttgccaagcaaggagatcctaagatgaagatccatggtgtggtggcttttaag
tgtgaaaacgtggcaactttagacccaataacttttgagaccccggaatctttcatttct
ttgcctaagtggaatgcaaagaaaacaggctcaatatcatttgatttccgtacaacggag
ccaaatggcctcatcttgtttagccacggcaagccaagacatcagaaggacgccaagcac
ccacagatgattaaggttgacttttttgctattgaaatgctggatggccacttgtacctc
ctcttagatatgggatcaggtactataaaaatcaaagccctgcaaaagaaagtcaatgat
ggagaatggtatcacgtggatttccagcgtgatggacggtcaggtaccatttctgtcaac
acactccgcactccctacacagctcctggtgagagtgagatcctggacttagatgatgag
ctgtatctgggtggcttgccagaaaataaggctggcctggtcttccccacagaagtgtgg
actgctctgctcaactacggctatgtaggctgcatccgggatctattcattgacggccaa
agcaaagacatcaggcagatggcggaaattcagagtactgcaggagtgaagccgtcctgc
tcaagggagacagcaaaaccgtgccttagcaatccttgcaaaaacaatggcatgtgcagg
gatggctggaacagatatgtctgtgactgctctggaacaggatatctcggcaggtcctgt
gagagagaggcaacggttttgagctatgatgggagtatgttcatgaaaattcagctccca
gtggtgatgcacactgaggccgaggatgtgtccttacggttcagatcccagcgggcatat
ggtattctgatggctaccacgtctagagactctgcagatacccttcgactggaactagat
gcagggcgtgtgaaactcacggtcaatctagattgtatcaggattaactgtaattccagc
aaaggccctgagaccctttttgctggctataacctcaatgataatgagtggcacacagtg
cgtgtggttcggcgaggaaaaagtttaaagctaactgtggatgatcaacaagccatgaca
ggtcaaatggcaggtgatcacacaaggctggagtttcataacatagagactggcatcatc
acagaacgacgctatctttcttctgtcccctccaatttcattgggcacctgcaaagcctg
acatttaatggaatggcatacatagacttgtgcaaaaatggtgatatagattactgtgaa
ctcaatgccaggtttggattcaggaacatcatcgcggatcctgtcaccttcaagaccaaa
tcaagctatgttgccttagctacattgcaagcctacacttctatgcatctatttttccaa
ttcaagacaacatccctagatggactaattctatataacagtggggatggaaatgacttc
attgtggttgaattagttaaagggtacttacattatgtgtttgacttgggaaacggtgct
aacctcatcaaagggagctcaaacaaaccactcaacgacaatcagtggcacaatgtgatg
atttcaagggacaccagcaatctccacacagtaaagatcgacacgaaaatcacaacacaa
atcactgcgggagccagaaatttagaccttaagagtgacttgtatattggaggagtggct
aaagaaacatacaaatctttgccgaaactggttcatgccaaagaaggctttcaaggttgc
ttggcatctgtggacttgaatggcaggcttccagatctcatctctgatgctcttttctgc
aacgggcaaattgagagaggatgtgaagggcccagcacaacctgccaagaggactcatgc
tcaaatcaaggcgtatgcttgcagcaatgggacggcttcagctgtgactgtagcatgact
tccttcagtggcccactctgcaatgaccctgggacaacatatatatttagcaaaggtggt
ggacagattacatataagtggcctcctaatgaccggcccagtacgcgagcagacaggctg
gccatcggttttagcactgtccagaaggaagcagtgttggtgcgtgtcgacagttcctca
ggcctgggtgactaccttgagctgcacatacaccaaggaaaaattggagttaagtttaac
gttgggacagatgacatcgccattgaagagtccaatgcaatcattaatgatgggaaatac
catgtagtacgtttcacgaggagtggtggcaatgccacgttacaggtggacagctggcca
gtcatcgagcgctaccctgcaggaaacaatgataacgagcgcctggcgattgctagacag
cgaattccatatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgtcag
ctcacaatcttcaatagccaagcaaccataataattggcgggaaagagcagggccagccc
ttccagggccagctctctgggctttactacaatggcttgaaagttctgaatatggcagca
gagaatgatgccaacatcgccatagtcgggaatgtgaggctggtcggtgaagtgccttcc
tctatgacaactgagtcgacagccactgccatgcagtctgagatgtccacctcaatcatg
gagaccaccacaaccctggctaccagcacagctagaagaggaaagcctcccacaaaggaa
ccaatcagccagaccacagatgatatccttgtggcatcagcagagtgccccagcgacgat
gaggacattgacccctgtgagccgagctcaggtgggttagccaaccccaccagagtgggc
ggccgcgaaccatacccaggctctgcggaggtgatacgggagtccagcagtaccactggc
atggtggtggggattgtcgcagccgcggctctgtgcatcctcatcctcctctatgccatg
tacaagtacagaaaccgggatgaagggtcataccacgtggatgagagtcgaaactacatc
agtaactcagcacagtccaatggggctgtggtcaaggagaagcaacccagcagtgcgaaa
agcgccaacaaaaacaagaagaacaaggataaggagtattatgtctga
DBGET
integrated database retrieval system
