Apodemus sylvaticus (European woodmouse): 127688054
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Entry
127688054 CDS
T10613
Symbol
Six1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
127688054 (Six1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127688054 (Six1)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127688054 (Six1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
127688054
NCBI-ProteinID:
XP_052042750
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All DBs
Position
6:49383174..49387861
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AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQSNMGH
ARSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgccgtcgtttggttttacgcaagagcaagtggcgtgcgtgtgcgaggtt
ctgcagcaaggagggaacctggaacgcctgggcaggttcctgtggtccttgcccgcctgc
gatcacctgcacaagaacgagagcgtgctcaaggccaaggcagtggtcgccttccaccgc
ggcaacttccgcgagctctacaagatcttggagagccaccagttctcgcctcacaatcac
cccaaactgcagcaactgtggctgaaagcgcactacgtggaggctgaaaaacttcgcggc
cgtcccctgggtgccgtgggtaaatatcgggtgcgccgaaaattcccgttgccgcggacc
atctgggatggcgaggagaccagctactgctttaaggagaagtctcggggcgtgctgcgg
gagtggtacgcgcacaacccctacccctcgccgcgggagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgccgaggccaaggaaagggagaacactgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaggaattc
tcacctccccaaagtccagaccagaactcggtcctactgcttcagagtaatatgggccac
gccaggagctcaaactattctcttccaggcctaacggcctcacagcccagccatggcctg
caggctcatcagcatcagctccaggactctctactgggcccacttacctccagtctggtg
gacttgggttcctaa
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