Apodemus sylvaticus (European woodmouse): 127688587
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Entry
127688587 CDS
T10613
Symbol
Dcaf1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
127688587 (Dcaf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
asyl01001
]
127688587 (Dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127688587 (Dcaf1)
Enzymes [BR:
asyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
127688587 (Dcaf1)
Protein kinases [BR:
asyl01001
]
Serine/threonine kinases: Other
Other
127688587 (Dcaf1)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127688587 (Dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
127688587
NCBI-ProteinID:
XP_052043351
LinkDB
All DBs
Position
7:complement(16774824..16834369)
Genome browser
AA seq
1506 aa
AA seq
DB search
MTTVVVHVDSKAELTTLLEQWEKDHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVALRQDSKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQEASRDMEISF
RLDSSHKTSSRVNSATKPEEGGLKKNKSAKHGDRENFRKAKQKLGFSSSDPDRVFVELSN
SSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYID
LKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLS
YNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRYD
GLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVKQ
SLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLLL
QLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISI
ILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLSQTLKSSEHT
LAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLF
SSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQS
RISFPEKELLLLIRNHLISKGLGETATVLTREADLPMTAASHSSAFTPVAAAASPVSLPR
TPRIANGIASRLGSHAAVGASAPSAPPAHPPPRPPQGSLALPGPSYAGNSPLIGRISFIR
ERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKN
PVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFR
PISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHL
EPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIAH
IYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMN
ISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDL
LEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMD
TVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDD
NNENAGEDGDNDFSPSDEELANLLEEGEEGEDEDSDADEEVELILGDTDSSDNSDLEDDI
ILSLNE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagtggtacatgtggactccaaagctgagctcactaccctgctggagcag
tgggaaaaggaccatggcagtgggcaggatatggtacctatccttaccaggatgtctgag
ttaattgaaaaagaaactgaagaatatcgtaaaggagatccagatccatttgatgatcga
catcctggtcgagctgatccagagtgtatgctgggccatttgctgagaatactcttcaag
aatgatgatttcatgaatgcactggtgaatgcgtatgtaatgacaagtagagagccccct
ttaaatactgcagcttgcagactgctactggacatcatgcctggtctagaaactgcagtt
gtctttcaagaaaaggaaggaattgttgaaaatcttttcaaatgggcccgagaggctgat
cagccacttaggacatattctactggactgctgggaggtgctatggaaaatcaagatatt
gctgccaactacagggatgaaaattcacagttggtggcaatagtgcttagaagactgagg
gagctccagcttcaagaagtggctttgcggcaggacagtaagcgtcctagtccacggaag
ctctcctcagaaccccttttgcctctggatgaggaagctgtggatatggactacggtgac
atggcagtagatgttgtggatggagaacaagaagcttctagagatatggagatctccttt
cgtcttgattcaagtcacaagaccagtagtagagtgaactcagcaactaaacctgaggaa
ggaggattaaagaaaaacaagtcagcaaagcatggtgacagagagaactttaggaaggcc
aagcagaagttgggcttctcatcttctgacccagatcgtgtgtttgttgagctgtcaaat
agcagctggtcagaaatgtccccctgggtgatcggcaccaactacactctctatcctatg
acccctgctattgagcagagacttattcttcagtatttgacccctctaggagagtatcag
gagttacttcccatattcatgcaacttggatcaagagaattgatgatgttttatattgat
ctgaaacagactaatgacgtcctgcttacttttgaggcactcaagcacctagcatctctc
ctgcttcataacaaatttgccacagaatttgttgcacatggtggagtacagaaattactg
gaaattcctcgtccttctatggctgcaactggtgtgtccatgtgcttgtattacctgtcc
tacaaccaggatgctatggaaagagtttgcatgcatcctcacaatgttctgtctgatgtg
gtgaattacaccctctggctaatggagtgttctcatgcttcgggatgttgccacgctact
atgtttttctcaatttgtttctcattccgggctgttttggagctctttgaccgttacgat
ggtcttcgtcgtctggtgaacttgatcagtactttggagattttaaatttggaagaccag
ggtgcacttttgagtgatgatgaaatatttgctagtcgccaaacaggaaaacatacctgc
atggctttgcgcaagtattttgaggctcacctggccattaaattggaacaagtcaagcag
tcacttcagaggactgagggtggtattcttgttcaccctcagcctccatacaaggcgtgc
tcatatactcatgagcagattgtggaaatgatggagtttttgatagaatatggcccagct
caattgtattgggaacctgctgaagtcttcctcaagctttcctgtgtgcagcttttactg
cagcttatttccatcgcctgcaattggaagacctattatgcaaggaatgacactgtacgt
tttgctttggatgtccttgctattctcactgtggtgccaaaaatccagctccagttggca
gagtcagtggatgtactagatgaggctgggtctactgtctccactgtaggtatcagcatt
attttgggcgtggctgagggtgagttctttatccatgatgctgaaattcagaagtcagca
cttcaaattatcatcaactgtgtatgtggtccagataaccgaatatccagtattgggaaa
tttatttctggaactcctcggagaaagctttctcagaccctgaagagcagtgagcatact
ctggccaaaatgtggaatgtggtccagtccaacaatggcatcaaggtgcttctgtcccta
ctgtccatcaagatgcccattacagatgcagaccagatccgggccctggcctgtaaggcc
cttgtaggcctctctcgaagtagcactgttcgacagatcatcagtaaacttccccttttt
agtagctgccagattcagcagctgatgaaggagcctgtgctacaggataagcggagtgac
catgtcaagttctgcaaatacgccgctgagctcattgagcgtgtatcaggaaagcctctt
ctcattggcactgatgtatctctcgcacgactgcagaaagcagatgttgttgctcagtcg
aggatctccttccctgagaaagagctgctcttgttgatacggaaccatctcatttctaaa
gggcttggagagacagcaactgtgttgacaagggaggctgacctgcctatgactgctgcc
tcgcattcttctgccttcaccccagtggctgctgctgcttcccctgtctctcttccccgg
acccctcggattgccaatggcattgcaagtcgactcggcagccatgctgctgtgggtgct
tctgccccttctgctcctcccgctcatcctccaccacgtcccccccagggttcattggct
ttgcctggcccatcatatgcaggcaactcccctttgattggtaggatcagttttatcaga
gagaggccatcaccgtgcaatggcaggaaaattcgagtgttgcggcagaaatcggaccat
ggtgcatacagccagagccctgccataaaaaaacaattggatagacatcttccttcccca
cctacgctggacagtatcatcacagagtatctcagagagcagcatgctcgatgcaagaac
cccgttgccacctgtcctcctttttccctctttactcctcatcagtgtcctgagccaaaa
cagaggcggcaagcgccaataaactttacctcaaggctaaaccgcagggcatcatttcca
aaatatggaggggtggatggcggatgctttgataggcaccttatctttagcagatttcgt
cctatttctgtattccgggaagctaacgaagatgaaagtggcttcacctgttgtgcattc
tcggctcgggagcggttcctgatgcttggcacctgtacagggcagctgaagctctacaat
gtattcagtggacaggaagaggccagctataactgtcacaactcagccattacacatctt
gaaccctcgagggatggatctttacttctgacatctgccacttggagccagcctttgtct
gcactttgggggatgaaatcagtatttgatatgaagcattccttcacagaagatcactat
gttgagttcagtaagcactctcaggatcgggtcataggcacaaaaggagacattgcccat
atttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgccaac
aactacaagaggaactgtgccacctttaatcctacagatgatcttgtcttaaatgatggc
gtcctctgggatgtccgctctgcacaggccatccacaagtttgacaagttcaacatgaat
atcagtggtgttttccatccaaatgggctggaagtcatcatcaatacagagatttgggac
cttcggactttccatcttttacacaccgttcctgctctggatcaatgtcgtgtcgtgttt
aaccacaccgggacagtgatgtacggagcaatgttgcaggccgatgatgaagatgactta
ctggaagagaggatgaaaagcccttttgggtcatccttccgaacattcaatgcaactgac
tataagcctatagcaactattgatgtgaaacggaacatctttgacctgtgcacagacacc
aaagactgttatcttgctgttattgagaatcaaggcagcatggatgcactgaatatggac
acagtatgcaggctctatgaagtgggtaggcagcgtctggcagaggatgaggacgaagag
gaggaccaggaagaggaagaacaggaggaagaggatgatgatgaagatgatgatgatact
gatgatttagatgaactagacactgaccagttgctggaagcagaactggaggaggatgac
aacaatgagaatgcaggagaggatggagacaatgacttctctccctctgatgaggagtta
gcaaaccttctagaggagggagaggagggggaagatgaagactctgatgcagatgaggaa
gtggaactgatcctgggggacacagacagctcggacaactctgatttggaagatgacatc
atcttatctctgaatgagtga
DBGET
integrated database retrieval system
