Apodemus sylvaticus (European woodmouse): 127688708
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Entry
127688708 CDS
T10613
Symbol
Trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04360
Axon guidance
asyl04724
Glutamatergic synapse
asyl04726
Serotonergic synapse
asyl04929
GnRH secretion
asyl04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
127688708 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
127688708 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
127688708 (Trpc1)
04726 Serotonergic synapse
127688708 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
127688708 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asyl04040
]
127688708 (Trpc1)
Ion channels [BR:
asyl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127688708 (Trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
127688708
NCBI-ProteinID:
XP_052043589
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Position
7:28112285..28158391
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AA seq
809 aa
AA seq
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MGAPPPSPGLPPSWAAMMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEEN
TLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENESLDILQLLL
DYGCQSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVI
LAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPA
LIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEV
ILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRR
KPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLY
SLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNS
LYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILG
PLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTF
HSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAM
LHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWVCS
HTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNEL
RQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgggggctccgcctccgtctcctggcctgcccccgtcgtgggccgcgatgatggcggcc
ctgtacccgagcacggacctctcgggcgtctcctcctcctccctgccttcctccccatcc
tcctcatcgcccaacgaagtgatggcgctgaaggatgtgcgagaggtgaaggaggagaac
accttgaatgagaagcttttcttgctggcgtgcgacaagggtgactattatatggttaaa
aagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagatgtgcttggg
agaaatgctgttaccataactattgagaacgaaagcttggatatactacagctgcttttg
gactacggctgtcagtccgcagatgcacttttggtggcaatcgactctgaagtagtggga
gctgttgatatactacttaatcatcggccaaaacgatcatcaagaccaaccattgtaaaa
cttatggaacgaattcagaatccggaatattcaacaacgatggatgttgcacctgttatt
ttagctgctcatcgtaacaactatgaaattcttacaatgcttttaaagcaggatgtgtct
ttgcccaagccccatgctgttggctgtgaatgcacgctgtgttctgcaaaaaacaaaaag
gacagcctcagacattccaggtttcgtcttgatatctatagatgtctggccagtccagct
ctaataatgttaacagaggaggatccaattctgagagcatttgaacttagtgctgactta
aaggaactcagtcttgtggaggtggaattcaggaatgattatgaagaactagcccgtcag
tgcaaaatgtttgccaaagatttgcttgcacaagcccggaattctcgtgaactggaagtt
atcctaaaccacacatcaagtgatgagcctcttgataaacggggactactagaggaaaga
atgaacttaagtcgtctgaaacttgctattaaatacaaccagaaggagtttgtctcccag
tcaaattgccagcagttcctgaacaccgtttggttcggacagatgtcaggttaccgccgt
aagcccacctgtaagaagataatgactgttttgacagttggcatcttctggccagttttg
tcactatgttatttgatagctcccaaatctcaatttggtcgaatcattcacacgcctttc
atgaagtttattattcatggggcatcatatttcacattcttgctgttactgaatctctac
tcacttgtctacaatgaggacaagaaaaatacaatggggccagcacttgagagaatagac
taccttctcattctgtggattattgggatgatttggtcagacattaagagactgtggtat
gaagggttggaagactttttagaagaatctcgtaaccagctcagctttgttatgaattcc
ctttacctggcaacctttgccctcaaagtggtggctcacaacaagtttcatgactttgct
gaccggaaggactgggatgcattccaccccacacttgtagcagaaggactctttgctttt
gcaaatgttctgagttaccttcggctcttctttatgtatacaaccagctctattctgggc
ccactgcagatttcgatgggacagatgttacaagattttgggaaatttctgggaatgttc
ctccttgttctgttttccttcactattggactgactcagctctatgacaaagggtacact
tccaaagagcagaaggattgtgtgggcatcttctgtgaacagcaaagcaacgataccttc
cactcgttcatcggtacctgcttcgctctgttctggtacatcttctccttagcacacgtg
gccatctttgtcaccaggtttagctatggggaagaactgcagtccttcgttggagctgtg
attgttggaacttacaatgtcgtggttgtgattgtgcttacaaagctgctggtagcaatg
cttcacaagagctttcagctgatagcaaatcatgaggataaagaatggaagtttgctcga
gcaaagctgtggcttagctactttgatgacaaatgcacactgccccctccgttcaacatt
attccttctccaaagacaatctgctatatgatcagtagcctcagcaagtgggtttgctcg
cacacctcgaaaggcaaggtcaaacggcagaacagtttaaaggagtggagaaacttgaag
cagaagagagacgagaactaccagaaggtgatgtgctgcctagtgcaccgctacttgaca
tccatgcggcagaagatgcagagcacagaccaggccaccgtggagaatctcaatgaactg
cgccaagatctgtcaaaattccgaaatgaaataagggatttgcttggctttcggacttct
aaatatgctatgttttatccaagaaattaa
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