Apodemus sylvaticus (European woodmouse): 127688802
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Entry
127688802 CDS
T10613
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127688802 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127688802 (Myo5c)
04131 Membrane trafficking [BR:
asyl04131
]
127688802 (Myo5c)
03029 Mitochondrial biogenesis [BR:
asyl03029
]
127688802 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asyl04812
]
127688802 (Myo5c)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127688802 (Myo5c)
mRNA cycle factors
P-body specific factors
127688802 (Myo5c)
Membrane trafficking [BR:
asyl04131
]
Others
Actin-binding proteins
Myosins
127688802 (Myo5c)
Mitochondrial biogenesis [BR:
asyl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127688802 (Myo5c)
Cytoskeleton proteins [BR:
asyl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127688802 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Csm1_N
Myosin_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
127688802
NCBI-ProteinID:
XP_052043748
LinkDB
All DBs
Position
7:complement(53857894..53932377)
Genome browser
AA seq
1735 aa
AA seq
DB search
MAVAELYAQYNRVWIPDPEDVWKSAEIAKDYRAGDRVLRLRLEDGMELDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEDFNYTSMGGNTVIEGVDDR
ADMVETQKTFTLLGFKKDFQMDIFKILAAILHLGNVQVTTVGHERSSVSEDDSHLKVFCG
LLGLETSKVAQWLCHRKIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFDFIIEQINLA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNSSFIIQHFADKVEYECEGFLEKNRDTVYDMLVEILRASKFHLCAAFFQESPVPSSPF
GAMITVKSARQTIKPNTKHFRTTVGNKFRSSLYSLMETLNATTPHYVRCIKPNDEKMPFE
FDSKRVVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGILMTQQELSLTDKKEVCKVV
LHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQDCIVIQKHVRGWLQRKKFLRER
QAALTIQQYFRGQQTVRKAITATALKEAWAAIILQKHCRGYLVRNLYQLIRVATITIQAH
TRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QSRENHGLVEKLTSLAAQRVGDQEKVQKLEAELEKAAAHRHSYEERGRRYRDTVEERLSK
LQKHSAQLELQKEQAEQRLQEKTEELKEKMDTLTRQLLDDVQKEEQQRLLLEKSFELKTQ
AYEKQIESLREEIKALKDERSQLHHQLEEGRVTSDSLKGEVARLSKQAKTISEFEKEIEL
LQAQKIDVERHVQSQKREMRERMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETDINESIRHE
VTRLTSENMMIPDFKQQISELERQKQDLESRLRELTEKMEGKPEELFSHLHRVREEERMQ
GKAIEAQSEEHPEGIQEPQEATKFPKKQPEAEEEAESILHQEASRLSLENRDLEEELDTK
DRMIKKLQDQVKTLTKTIEKANNVHLPSGSKEYLGMLEYKKEDEAKLIQNLILDLKPRGV
VVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSAINGIKHVVKEHLEDLEMLSFWLSN
TCHFLNCLKQYSGEEEFMRYNSPQQNRNCLRNFDLAEYRQILSDVAIRIYHQFIIVMENN
LQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYSTMCQNGL
DPEIVRQAVKQLFYLVGTVTLNSLLLRKDMCSCRKGMQIRCNISFLEEWLKDKNLQNSLA
KETLEPLSQAAWLLQVKKTTDSDAKEISQCCTSLSAVQIIKILNSYTPIDDFEKRVNPSF
VRKVQALLNNRGDSSQLMLDTKYRFQVTFPFTASPHALEMTQIPSSFKLGFLRRL
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctctacgcgcagtacaacagggtttggatcccagatcctgaagac
gtttggaagtcagctgaaattgcgaaggactacagagcgggtgaccgagtcctccgactc
cgcctagaggatggcatggagctggattaccctgttgacccagggtcactgcctccgctt
cggaacccagacatcctggtgggtgagaatgatctcacagccctcagctacctccatgaa
cctgcagtgctgcataacctcagaatccgcttcgcagagtccaaactcatctacacctac
agtggaatcattttggtggctatgaatccttacaaacagctaccaatatatggggatgcc
atcatccacgcctacagcggacagaacatgggtgacatggacccacacatcttcgcggtt
gcagaggaggcctacaagcagatggccaggaacaatagaaatcaatccataattgtgagt
ggagaatccggagccggcaagactgtctctgcgcgctatgccatgaggtacttcgccacc
gtcagcaaatccagcagcaacgcccatgtggaggacaaagtcctggcatccaatcccata
actgaggctgttggaaatgccaagaccacacgcaatgacaacagcagtcggtttgggaaa
tacacagaaatcagctttgatgagagaaaccagatcattggtgccaatatgagaacctac
ctcctggagaagtccagagttgtctttcagtcagaaaatgaacggaattaccacatcttc
taccagctttgtgcatccgcacagcagtcagaatttaaacaccttaagctggggagtgca
gaagatttcaactatacgagcatgggagggaacactgtcattgaaggtgtcgatgacaga
gctgacatggtggagacccagaagaccttcacactcctgggattcaagaaagattttcag
atggacatttttaagatcctagcggccatcctgcacctgggcaatgtgcaagtcaccaca
gtgggccacgagaggtcgtcagtcagtgaggatgacagtcacctgaaggtgttctgtgga
ctcttaggcctggagaccagcaaagtggctcagtggctatgccacagaaaaatcgtgacc
tcctcagaaactgtggtaaagcccatgaccaggcctcaggccgtcaacgccagggatgcg
ctggccaaaaagatctatgctcacctgttcgacttcatcatagagcaaatcaacctggca
ttgcagttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
accttcgatgtaaacagctttgaacagttctgcatcaattacgctaatgaaaagctgcag
cagcagtttaacctgcacgtctttaaactcgagcaagaggaatacatgaaggaggacatc
ccttggactctgatagacttctatgacaatcaacctgttattgacctgatcgaagcaaaa
atgggcattttggagttgctggatgaagaatgcttgttgcctcatgggactgatgaaaac
tggcttcaaaagctatataacaactttgtcaacaagaactctttattcgagaagcctaga
atgtccaactcatccttcatcatccagcactttgctgacaaggtggagtacgagtgtgaa
ggcttcctggagaagaacagagacactgtctatgacatgctggttgaaatcctcagagca
agcaagtttcatctctgtgctgccttttttcaagaaagccctgttccgtcttctcccttt
ggggccatgatcacagttaaatctgcaaggcagaccatcaagccaaacaccaagcacttc
cggaccacagttgggaacaagttccgcagctctctgtattcgctcatggagaccctcaat
gccaccacaccccactacgtccggtgcatcaagccaaatgatgagaaaatgccctttgag
tttgactccaaacgggttgtccagcagctgagagcctgtggtgttttagaaacaatccga
atcagtgcccagagctacccttccaggtggacgtacctggagttctacagtcgctatggc
atcctcatgacgcagcaggagctgtccctcacggataagaaggaagtgtgcaaggtggtt
ttgcacaggctcatccaggattctaaccagtaccagtttggtagaaccaaaattttcttc
agagcaggacaagtggcttacttagagaaactccgcttggataaactaagacaagattgt
attgtgattcaaaagcacgtgcggggctggctgcagaggaaaaagttcctccgggagaga
caggctgccctgacaatccagcagtacttccggggtcagcagacagtgaggaaggccatc
actgccactgctttgaaggaggcctgggcagccatcatcctccagaagcactgccgaggc
tacctggtccgtaacctgtaccagctgatccgagtggccaccatcaccatccaggcacac
accaggggcttcctggccaggaggcggtaccggaagttgctgcaggagcacaaggcagtg
atccttcagaagtatgcgagggcatggctggcccggcgcagattccagaacatccgcagg
ttcgtgctcaacattcagctgacttacagggtccagcgcttgcagaagaagctggaggat
cagagcagagagaaccacggactggtggagaagttgaccagcctggctgctcagcgggtt
ggcgaccaggaaaaggttcagaagctggaagcagagctggaaaaagcagctgcccaccgc
cacagctatgaagagaggggccggagatacagggacacggtggaggagaggctgtcaaag
ctgcagaagcacagcgcacagctggagttgcagaaagagcaagcagagcagcggctgcaa
gagaagaccgaggagctgaaagaaaaaatggacacgctcaccaggcagctgctggatgat
gtgcagaaagaagaacagcagaggctacttcttgaaaaaagttttgagctgaaaacacaa
gcctatgagaaacagatagagtctctgagagaagaaattaaagccctcaaggacgagcgg
tcgcagctgcatcaccagctggaggagggacgggtcacctctgacagcctgaagggggag
gtggcccgcctaagcaagcaggcaaagaccatctctgagttcgagaaggagatagaactg
ctgcaagcccagaagatagatgtggaaagacacgtgcagtcacagaaacgggagatgaga
gaacggatgtcagaggtcaccaagcagctgttggagagctatgacatcgaagatgttaga
agcaggctctccgtggaagatctggaacatttaaatgaagatggagaactttggtttgcc
tacgaaggactaaagaaagctactcgagttctggagagccatttccagtctcagaaggat
tgctatgaaaaagagattgaaggtctgaacttcaaagtcgtgcacctgagccaagaaatc
aaccacctgcagaagctgttcagagaagagacagacatcaatgaaagtatccggcatgaa
gtcaccaggctgacatcagaaaacatgatgatcccagactttaagcagcagatttcagag
ttggagaggcagaagcaggatctcgaatcccgcctgagggagctgactgagaagatggaa
ggaaaacctgaagagctgttcagccacctgcaccgggtccgagaagaggagagaatgcag
ggcaaggccatagaagcacagagtgaggagcatcccgaagggatccaagaaccgcaggag
gccaccaagttcccaaagaagcaaccagaagctgaggaggaagcagagagtattcttcat
caagaggcatcccggctctctttggaaaacagggatctggaggaagagttagacaccaag
gacagaatgattaaaaagctacaggatcaagtcaagactctgaccaagacaattgaaaaa
gccaacaatgtgcacctgccctcgggatccaaggagtaccttgggatgctggaatacaag
aaagaagatgaggcgaaactcattcaaaacctcattctcgacctgaagccccgaggtgtg
gtggtgaacatgatccctgggctgccagctcacatcctgttcatgtgtgtgcgctatgca
gactccctgaacgatgccaacatgctcaaatccctcatgaacagtgctattaatggcatc
aagcatgtggttaaggaacatttggaagacttggagatgctgtccttctggctttccaac
acctgtcattttctcaactgcctgaagcagtacagtggagaagaggagtttatgaggtac
aacagcccacagcagaataggaactgcttgagaaattttgatcttgcagaatacagacag
atcctcagtgatgtagctatccggatttatcatcagttcatcatcgtgatggagaacaac
ctccagcccataatagtgccaggcatgctggagtatgagagtctgcagggcatttccggc
ctgaagcccaccggtttccggaagcgctcatccagcatcgatgacacagatgcctacacc
atgacgtccatcctgcagcagctgagctacttctatagcaccatgtgtcagaacggcctg
gaccccgagattgtgaggcaggcggtcaagcagctgttctacctggtcgggacggtgacc
ctcaacagcctcctcctgcgcaaggacatgtgctcctgcaggaaaggcatgcaaatcagg
tgcaacatcagcttcttggaagaatggctaaaagataagaatttgcagaacagcttagcc
aaggagacactggagcccctctctcaggcagcctggttgcttcaggttaagaagaccaca
gacagcgatgccaaggagatctcgcagtgttgcacttccctgtctgctgtgcagatcata
aagatccttaattcatacacacctatagacgacttcgagaaaagagtcaatccatccttc
gttcgcaaagtacaggctcttctgaataaccggggtgactcgtcacagctgatgctagac
accaagtatcgttttcaagtcacatttcccttcaccgcctcgccgcatgccctggagatg
acccagatccccagcagcttcaagctgggctttctccggagactgtag
DBGET
integrated database retrieval system
