Apodemus sylvaticus (European woodmouse): 127688812
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Entry
127688812 CDS
T10613
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127688812 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127688812 (Myo5a)
04131 Membrane trafficking [BR:
asyl04131
]
127688812 (Myo5a)
03029 Mitochondrial biogenesis [BR:
asyl03029
]
127688812 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asyl04812
]
127688812 (Myo5a)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127688812 (Myo5a)
mRNA cycle factors
P-body specific factors
127688812 (Myo5a)
Membrane trafficking [BR:
asyl04131
]
Others
Actin-binding proteins
Myosins
127688812 (Myo5a)
Mitochondrial biogenesis [BR:
asyl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127688812 (Myo5a)
Cytoskeleton proteins [BR:
asyl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127688812 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
MC7
DUF5382
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
127688812
NCBI-ProteinID:
XP_052043763
LinkDB
All DBs
Position
7:complement(53943563..54103271)
Genome browser
AA seq
1877 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTNELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADSFHYTKQGGSPMIDGVD
DAKEMAHTRQACTLLGISESYQMGIFRILASILHLGNVGFASRDSDSCTIPPKHEPLIIF
CDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFTWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PTSATSSGRTPLTRVPVKPTKGRPGQTAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKRYLCMRRAAVTVQRHVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRRYKIRRAA
TIVLQSYLRGYLARNRYRKILREHKAVIIQKRVRGWLARTHYKRTMKAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKVDEQNKDYKCLMEKLTNLEGVYNSE
TEKLRNDVERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKSIEERADKYKQET
EQLVSNLKEENTLLKQEKETLNHLIVEQAKEMTETMERKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMLNVPKPGHKRTDSTHSSNESEYTFSSEFAETEDIAPRT
EEPVEKKVPLDMSLFLKLQKRVTELEQEKQLMQDELDRKEEQVLRSKAKEEERPQIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRSST
MDYQELNEDGELWLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRMIDLMEQ
LEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLE
YKREDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTIN
SIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEY
RQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQ
IVKVLNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLAL
ETIQIPASLGLGFIARV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccgagctctacaccaagtttgccagggtttggatacctgatcctgaggaa
gtttggaagtcagcagagttgctcaaggattataagcctggagataaagtgctcctgctt
caccttgaggaagggaaggatttggaataccgtctagatccgaagaccaatgagctcccc
cacttacggaaccctgacatacttgtcggagagaatgacctcacggccctcagctatctt
cacgagcccgctgtgctgcataatctccgggttcgcttcatcgattccaaactgatttat
acgtattgtggaatagtcctagtagctataaatccctatgagcagctgcctatttatgga
gaagacattattaacgcctacagcggccagaacatgggtgacatggatcctcacatcttt
gcagtagctgaagaggcttacaagcagatggcaagggatgaacgaaatcagtccatcatt
gtaagtggagagtcaggcgcggggaagactgtctcggctaagtatgccatgcggtacttt
gcaactgtaagtggttctgccagtgaggccaatgtggaggaaaaggtcttggcctccaac
cccatcatggagtcaattggaaatgccaaaacaaccaggaatgataatagcagccggttt
ggaaaatatattgaaattggttttgacaagagatacagaatcatcggtgccaatatgaga
acttaccttttagagaagtccagagtggtgttccaggcagaagaggagagaaactaccat
atcttctatcagctctgtgcttcagcaaagttaccggagtttaaaatgctgcggttagga
aatgcagatagttttcattacacgaaacagggaggcagccctatgatagacggagtagat
gatgcgaaggagatggcacacaccaggcaggcctgcactctgctgggaattagtgaatct
taccaaatgggaatatttcgaatacttgctagcattcttcacttaggcaatgttggattt
gcatctcgagattcagacagctgcacaatacctccaaagcacgagcctcttatcatcttc
tgtgacctgatgggtgtggattatgaagagatgtgtcactggctctgccaccgaaagctg
gctactgccacagagacatacatcaagcccatctccaagctgcaggccacaaatgcccga
gatgctctagcaaagcacatttatgcgaagctcttcacctggattgtggaccatgtcaac
caggctctccattctgctgtcaagcagcactccttcatcggtgtgctggacatctatgga
tttgaaacatttgagataaatagttttgaacagttctgcataaattatgcaaatgaaaaa
ctacagcaacaattcaacatgcatgtcttcaaattggaacaggaggaatatatgaaggaa
caaattccatggacactcatagatttctatgataatcagccttgtatcaatcttatagaa
tctaaactgggcattctcgatttgctggatgaggaatgtaagatgcctaaaggcacagat
gacacatgggcccaaaaactgtacaatacccatttgaacaaatgcgccctctttgagaag
ccccgcatgtcaaacaaagctttcatcatcaaacattttgctgacaaagtggagtaccag
tgtgaaggttttcttgaaaagaataaagacaccgtttttgaagaacaaattaaagttctt
aagtcaagcaagtttaagatgctaccagagctatttcaagatgatgagaaggccatcagt
cccacctctgccacctcctcagggcgcactccgctcactcgcgttcctgtaaagcccacc
aagggccgccctggtcagacggccaaagagcacaagaagacagtgggacatcagtttcga
aactcccttcacctgcttatggaaacccttaatgccactactcctcactatgtacgctgt
attaagcctaatgatttcaagtttccattcacatttgatgagaagagggcagtgcagcag
ctaagagcatgtggtgtcttggagaccatccggatcagcgcagcagggtttccctcacgg
tggacttatcaagagtttttcagccggtaccgggtcctaatgaagcaaaaagatgtgctg
ggagatagaaagcaaacatgcaagaatgtgttagagaaactgatattggacaaggataaa
taccagtttggtaagacaaagatctttttccgtgctggtcaagtggcctatctagaaaaa
ttgagggctgacaaactgagggctgcctgcatcaggatccagaagaccattcgtgggtgg
ctgctaaggaagagatacctgtgcatgcggagggcggccgtcacagtgcagcgacacgtg
cggggctatcaggctcgatgctatgctaagtttctgcgtagaaccaaggcagcaaccacc
attcaaaagtactggcgcatgtatgtggtccgcaggaggtacaagattagacgagctgcc
acgattgttcttcagtcttacttgagaggctacttggcaagaaataggtatcgcaagata
ctccgtgagcataaagcagtcatcattcagaaacgtgtccgtggctggttggctcgtaca
cattataagaggaccatgaaagccatcatctaccttcagtgctgcttccgacggatgatg
gccaagcgtgagctgaagaaactcaaaattgaggctcgctcggtggaacgctataagaag
ctccatattggcctggaaaacaagattatgcagctgcagcgcaaagtggatgagcagaat
aaagactacaaatgcctcatggagaaactgaccaatctggagggagtatacaactctgag
actgaaaaactacggaatgatgtagaacgactccagctaagtgaagaggaagctaaggtt
gccactgggcgggtccttagtctgcaggaagaaattgcaaaactccgaaaagacctggaa
caaactcgatcagagaaaaaatccattgaagaacgagcagataaatacaaacaagaaact
gagcagctggtgtcaaacttgaaggaagaaaacactttgctgaagcaggaaaaggagacc
ctcaatcacctcattgtggagcaggctaaggagatgacagaaactatggagaggaagtta
gtagaagagacaaaacaactggaacttgacctgaatgatgagaggctgaggtatcagaac
cttctgaatgagttcagtcgcctggaggagcgctatgatgacctcaaggaagagatgacc
ctgatgctgaatgtgcctaagccaggacacaagagaacagactctacccacagcagtaat
gagtctgaatacaccttcagctctgaatttgcagaaacggaagacattgcaccaagaaca
gaggagccagttgagaagaaggtgcctctggacatgtcattgttccttaagctccagaag
cgtgttacagagctggaacaggagaagcagctgatgcaggatgagctggaccgaaaggag
gagcaggtgcttcgcagcaaggcaaaggaagaagaaagaccacagattagaggtgctgaa
ctggaatatgagtccctcaagcgtcaagaactagagtcagaaaacaaaaaactgaaaaat
gagctgaatgagttacgcaaagccctcagtgagaagagtgcccccgaagtgactgcgcca
ggtgcgcccgcgtaccgagtcctcatggaacagctgacctccgtgagcgaggagcttgat
gtccgcaaggaggaggtcctcatcttgaggtcacagctggtgagccagaaggaagccatc
caacccaagaatacaatgacagattccacaattcttttggaagatgtacagaaaatgaaa
gacaaaggtgaaatagcacaggcatatattggtttgaaagaaacaaacagatcatctact
atggattaccaggagttgaatgaggatggagagctctggctggtttatgaagggttaaaa
caagccaacaggctcttagaatcccagctacagtcacagaagaggagccatgagaatgag
gctgaggccctccgtggggagatccagagcctaaaggaagaaaataaccggcagcagcag
ctgctggcccagaacctgcagctgccccctgaggcccgcattgaggccagcctgcagcat
gagatcacccggctgaccaatgaaaacctgtattttgaggaattatatgcagatgaccct
aagaagtatcaatcctatcggatttcactttacaaaaggatgattgatctgatggaacaa
cttgaaaagcaggataaaactgtccggaaactaaagaaacaactgaaagtctttgccaaa
aaaatcggtgaactagaagtggggcagatggagaacatatctccaggacagatcattgat
gagcctatccggccagtcaacattccccggaaagaaaaggatttccaaggaatgctggag
tacaaaagggaggatgagcagaagcttgtgaagaacctgattctagaactaaagccacgt
ggtgtagctgtcaatctgattccagggttaccagcatatatcttgtttatgtgtgtgcgg
catgccgactacctgaacgatgatcagaaagtaagatcattgctgacatcgacaattaac
agcatcaaaaaagtcttaaagaaaagaggtgacgattttgaaactgtctccttctggctc
tctaacacatgtcgatttttgcactgtttgaagcaatatagtggagaagagggcttcatg
aaacacaacacatctcgccagaatgaacactgcctcaccaattttgaccttgctgaatac
cggcaagtactgagtgacttggccattcagatctatcagcagcttgtgagggtgttagag
aacattcttcagccaatgatagtctcaggcatgctagagcatgaaacgattcagggcgta
tctggggtgaagcccacggggctcagaaagcgcacctccagtatcgcagatgagggcacc
tacacactggactccatcctgcggcagctcaactccttccattcagtcatgtgtcagcat
ggcatggacccggagctaatcaagcaggtggtcaagcaaatgttctacattgtgggcgcc
attaccctcaacaacctcctcctgcgcaaggacatgtgctcctggagcaaaggcatgcag
atcaggtacaatgtcagtcaactggaagaatggctacgtgacaagaatctaatgaacagt
ggggccaaggagactctggaacctctcatccaggccgctcagcttttgcaagtgaaaaag
aaaactgacgatgatgcagaagccatctgctccatgtgcaacgccctgaccacagcccag
atcgtcaaagtgttgaatctgtacacacccgttaatgagtttgaagaaagggtctctgtt
tcattcatccgcaccatacagatgcggttacgagacaggaaagactctcctcagctgctc
atggatgcgaaacacatctttcctgtcacttttccctttaacccatcctccctggcccta
gaaaccatccagatcccagccagcctgggcctgggcttcatcgcacgggtctga
DBGET
integrated database retrieval system
