Apodemus sylvaticus (European woodmouse): 127688865
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Entry
127688865 CDS
T10613
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04659
Th17 cell differentiation
asyl04710
Circadian rhythm
asyl05017
Spinocerebellar ataxia
asyl05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
127688865 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
127688865 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
127688865 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
127688865 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127688865 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asyl03310
]
127688865 (Rora)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127688865 (Rora)
Nuclear receptors [BR:
asyl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127688865 (Rora)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127688865
NCBI-ProteinID:
XP_052043875
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Position
7:complement(59653004..59750227)
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AA seq
467 aa
AA seq
DB search
MYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQP
GEAEPLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDI
NGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQ
QITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLL
KAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLT
EDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVST
LRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatcgcagcgatgaaagctcaaattgaaattattccatgcaagatctgt
ggagacaaatcgtcaggaatccattatggtgtcattacgtgtgaaggctgcaagggcttt
ttcaggagaagtcagcagagcaatgccacctactcctgtcctcgtcagaagaactgtttg
atcgatcggaccagcagaaaccgctgccagcactgtcggctgcagaaatgcctggccgtg
gggatgtctcgagatgctgtcaagtttggccggatgtccaagaagcaaagagacagcttg
tacgccgaggtgcagaagcaccggatgcagcagcagcagcgcgaccaccagcagcagcct
ggggaggctgagccgctgacgcccacttacaacatctcagccaatgggctgacggaactg
catgatgacctcagcacctacatggacgggcacaccccggagggcagcaaggcagactca
gctgtcagcagcttctacctggacatccagccctccccagaccagtcgggattggacatc
aatgggatcaaacccgaacccatatgtgactacacaccagcatctggcttcttcccctac
tgctccttcaccaatggagagacttccccaaccgtgtccatggcagaactagaacacctt
gcacagaacatatccaaatcccacctggagacctgccagtacttgcgggaagagctccag
cagataacgtggcagaccttcctgcaggaggagattgagaactaccagaacaagcagaga
gaggtgatgtggcagctgtgtgccatcaagattacagaagctatccagtacgtggtggag
tttgccaaacgcattgatggatttatggagctgtgtcaaaatgatcaaattgtgcttcta
aaagcaggctcactggaggtggtgtttatcaggatgtgtcgtgcctttgactctcagaac
aacaccgtgtactttgacgggaagtatgctagccctgatgtcttcaaatccttaggttgt
gaagacttcattagctttgtgtttgaatttgggaaaagtttgtgttctatgcacctgact
gaagacgaaatcgcattattttctgcatttgtactgatgtcagcagatcgctcgtggctt
caggaaaaggtaaaaatagaaaaactgcaacagaaaattcagctagcccttcagcatgtc
ctacagaagaaccaccgagaagatggaattctaacaaagctaatctgcaaggtgtctacg
ttacgagccctatgtggacgacacacagaaaagctaatggcatttaaagcaatataccca
gacattgtgcgactccattttcctccgttatacaaggaattgttcacttcagaatttgag
ccagcaatgcaaattgatgggtaa
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