Apodemus sylvaticus (European woodmouse): 127688957
Help
Entry
127688957 CDS
T10613
Symbol
Thsd4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127688957 (Thsd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asyl04990
]
127688957 (Thsd4)
Domain-containing proteins not elsewhere classified [BR:
asyl04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
127688957 (Thsd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_CCN
PLAC
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
127688957
NCBI-ProteinID:
XP_052044094
LinkDB
All DBs
Position
7:68535242..69129051
Genome browser
AA seq
1017 aa
AA seq
DB search
MVSHLTSCFSALGALLLLGSQLVCPQPSTEHRKVPQRMAVAEGIPEDSGGGSPGVWGSWG
PWSACSRSCSGGVMEQTRPCLPSSYRARGGSRPNGPTLSITGHVVSAVRTSVPLHRSQED
QRALAGSNASHQGPTVVRGSRHPQARGRDPSERRSRTRGPIGPGKYGYGKAPYILPLQTD
TAHTPQRLRRQRPSSRHSRSQEASASKQGYRPPTHQFSHSRPLYQSDSGPRSGLTPSEAS
IYQLPLTHDQSYPATSSLFHSPELSGNNGARPHGAAQAFPQHLRSTAISCIGAYRQYKLC
NTNACPESGRSIREVQCASYNNKPFMGRFYEWEPFAEVKGNRKCELNCQATGYRFYVRQA
ERVIDGTPCDQNGTAICVSGQCKSVGCDDFLGSDKVVDKCGVCGGDNTGCQVVSGVFKHA
LTSLGYHRVLEIPQGATKINITEMHKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGGTM
FTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMGNNAISPQVPPHR
RPGEPFNGQLETEDRGQEDREEREKNQEKEDSHVEAPEVFTSESTQTFPVRHPERFPSHR
PDNLVPPAPQPPRRSRDHNWKQLGTTECSTTCGKGSQYPIFRCVHRNTHEEVPESYCDSS
MKPTPEEEPCNLFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRSLTVQPYRCQH
LEKPETTSTCQLKICSEWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKLR
PNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHVSSLPLEGCGNNRPAE
ATPCDNGPCTGKVEWFAGSWSQCSVECGSGTQQREVICVRKNADTFEVLDPYECSFLEKP
PSQQACHLKPCGAKWFSTEWSMCSKSCQGGFRVREVRCLSDDMTPGSLCDPQLKPEERES
CNPQDCVPEVDENCKDKYYNCNVVVQARLCVYNYYKTACCASCTRVANRHTSFLGSR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccatctcacaagctgtttcagtgccctgggtgccctcctgctgcttggttct
cagcttgtctgcccacagccctccactgaacacagaaaggtcccacaacggatggcggtg
gctgagggaatcccagaggacagtggtggtggctctccaggtgtgtggggctcctggggc
ccctggtctgcctgttcgcgcagctgcagtggtggtgtgatggagcagacacggccctgc
ctgcccagctcctaccgcgctcgaggaggctcccggcccaatggccctacactatccatc
actggccacgttgtgtcagccgtacggacctcagtaccactgcatcgaagccaggaggac
caacgtgccctggctggttccaatgccagccaccaaggccccacagtggtgcgaggcagc
cgacacccacaggcccgaggccgtgatccctcagagagaaggagcaggacccgaggtccc
atcggccctggcaagtatggctatgggaaggctccctacatcttaccactgcagacggat
accgcccatactccacagaggcttcggagacaaaggccttcatccaggcactccaggtcc
caggaggcatctgcttctaagcagggctacaggccacccacccaccagttctcccacagc
agacctctctaccagagcgacagtggccctcgttctggactgacaccttctgaggcctct
atctatcagctgcccttgactcatgatcaaagctatcctgcaacttcaagtctcttccac
agcccggaactgagtggcaacaatggtgctaggccccatggggcagctcaggcctttccc
cagcatctgcgatctacagcaatctcctgcatcggggcctatcgccagtacaaactgtgc
aacaccaatgcgtgcccagaaagtggtagaagtatccgggaggtacagtgtgcatcctac
aacaacaagccattcatgggccggttttatgaatgggaaccgtttgcagaagtaaagggc
aatcggaagtgtgaactgaactgccaagcaacaggctaccgcttctacgtacggcaagct
gagagggtcattgatggcacaccctgtgatcagaatggcacagcgatctgtgtgtcaggg
cagtgcaagagcgttggctgtgacgacttcctgggatctgacaaagttgtggacaagtgt
ggggtgtgtggaggtgacaacacgggctgccaggtggtgtcaggagtatttaagcatgcc
ctcaccagcctgggctaccaccgagtgctagagattccccaaggagccacaaaaattaac
atcaccgagatgcacaagagcaacaactacttagccttgcgaagtcgctctggccgatct
atcatcaatgggaactgggcaatcgatcgccctgggaagtacgagggcggaggcacaatg
ttcacctacaagcgacccaacgagatctccagcaccgctggggagtccttcttggctgaa
ggtcctactaatgagatcttggatgtctatatgatacaccagcagcccaacccaggagtc
cactatgagtacgtgatcatggggaacaatgccatcagcccacaggtgccaccgcaccgg
agacccggagaacctttcaatgggcagttggaaacggaagacagaggccaggaggacaga
gaagagagggagaagaaccaggagaaggaagactcacacgtcgaggcccctgaggtattc
acatcagaatccacgcagaccttcccagtcaggcatccagagagattcccttcccaccga
ccagacaacttggtgcccccagccccacaaccccccaggcgaagccgagaccacaactgg
aagcagctgggaacaacagaatgttccaccacctgtgggaaaggatcgcagtaccctatc
ttccgctgtgtgcacagaaacacacatgaggaggttcctgagagctactgtgactccagc
atgaagccgaccccagaggaggagccctgcaacctcttcccctgcccagccttctgggac
attggggagtggtccgagtgcagcaagacctgcggcctgggcatgcagcaccgccaggtc
ctgtgccgccaggtgtatgccaaccggagcctgacggtgcaaccctaccgctgccagcac
ctggagaaaccagaaaccaccagcacctgccagctcaagatctgcagcgagtggcagatt
cggaccgactggacctcgtgctcggtgccctgtggcgtggggcagcggacccgagacgtg
aagtgcgtgagcaacatcggggacgtggtggatgacgaagagtgcaacatgaagctccga
ccaaacgacattgagaactgtgacatgggaccctgcgccaagagctggttcctcacagaa
tggagcgaaaggtgctcagcggagtgtggggctggagtgaggacacgttcagtggtgtgc
atgaccaaccacgtcagcagcctgccgttggaaggctgtgggaacaacaggccagcggag
gcgaccccgtgtgacaatgggccctgcacaggcaaggtggagtggttcgctggcagctgg
agtcagtgttccgttgagtgtggcagtgggacacagcagagggaggtgatctgtgttagg
aagaatgcagacacctttgaagtgctagacccttatgagtgttccttcctggagaagccc
ccgagccagcaggcctgccacctcaagccttgtggagctaagtggtttagcacagaatgg
agcatgtgctccaagagctgtcagggcggattccgggtgcgggaagttcggtgtctctca
gacgacatgaccccgggcagcctctgcgacccccagttgaaaccagaagagagagaatct
tgtaaccctcaggactgtgtccctgaagttgatgaaaactgcaaggacaagtactacaac
tgcaacgtggtagtccaggcgcgcctctgtgtctacaactactacaagactgcctgctgt
gcctcttgcacccgagtggccaacagacacaccagctttctggggagccgataa
DBGET
integrated database retrieval system
