Apodemus sylvaticus (European woodmouse): 127689018
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Entry
127689018 CDS
T10613
Symbol
Sin3a
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04350
TGF-beta signaling pathway
asyl04919
Thyroid hormone signaling pathway
asyl05016
Huntington disease
asyl05169
Epstein-Barr virus infection
asyl05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127689018 (Sin3a)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
127689018 (Sin3a)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
127689018 (Sin3a)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
127689018 (Sin3a)
09164 Neurodegenerative disease
05016 Huntington disease
127689018 (Sin3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127689018 (Sin3a)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
127689018 (Sin3a)
REST complex
127689018 (Sin3a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
127689018 (Sin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
127689018
NCBI-ProteinID:
XP_052044219
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All DBs
Position
7:complement(71976171..72039359)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRIPGSTEAFSHQHRVLAPAPPVYEAVSETMQSATGIQYSVAP
NYQVSAVPQSSGSHGPAIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSSQSAPTPAQ
PAPQPTPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQMRRHSGTGATPPVKKKPKLISLKESSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLESFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAPKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEVCVQ
VTDLYLAENNNGATGGQLNSQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMSSDTTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENVESLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTVFKAP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgtttggatgaccaggaatcaccagtgtatgcagcccagcagcgaaggatt
cctggaagcacagaggctttttctcaccagcaccgggtacttgccccggcccctcctgtg
tatgaagcagtgtctgagaccatgcagtcagctacaggcattcagtactcagtggcaccc
aactaccaggtttcagcagtcccacaaagttctggcagtcatgggcctgccatagcagca
gttcatagcagtcatcatcaccccacagctgtccagcctcatggaggccaggtggtccag
agccatgcccatccagccccaccagttgcacccgtgcagggacagcagcagtttcagagg
ctcaaggtggaggacgccctgtcctatcttgaccaggtgaaactgcagtttggtagtcag
cctcaggtctacaatgatttccttgacatcatgaaggaatttaaatctcagagcattgat
actccaggagtgattagccgagtgtcccagctatttaaaggccaccctgacctgatcatg
ggcttcaacaccttcttgcctcctggatacaaaattgaggtgcagactaatgacatggtg
aacgtgacaacacccggccaagttcatcagattcctacccatgggatccaaccccagcct
cagccaccacctcagcatccttcccagccttcatcccagtcagctcccactcctgctcaa
ccagctcctcagcccacacctgccaaagttagcaagccttcccaactacaagcacatact
ccagccagtcagcagactcccccactcccaccatatgcatccccacgttctccaccagtc
cagcctcacacaccagtgacaatctccttgggaacagctccatctttgcaaaacaatcaa
cctgtggagtttaatcatgccatcaactatgttaataagatcaagaacagattccagggc
caaccagacatctacaaagcattcttggagattttgcacacataccagaaagaacagcgg
aatgccaaggaagctggaggaaactacactccagctttgactgagcaggaggtatatgcc
caggtggctcgtctcttcaaaaaccaggaagatctgttgtcagagtttggacagtttctg
ccagatgccaacagctcggtgcttttaagcaaaacaactgctgagaaggtggattctgtg
agaaatgaccatggaggcactgtgaagaagccccaattgaataataagccacagaggccc
agtcagaacggctgccagatgcgcaggcactccggaacaggagccactcctccagtgaag
aaaaaacccaaactgattagtctaaaggaatcttcaatggcagatgccagcaagcatggt
gttggaactgaatcattatttttcgataaggttcgaaaggctcttcggagtgcagaggcc
tatgaaaacttccttcgctgccttgttatctttaaccaggaggtgatctctcgggctgag
cttgtccagctagtctctccttttctggggaaattccctgaattgtttaattggtttaaa
aactttttgggctataaggagtctgtacatctggaaagctttccaaaggaacgagctaca
gaaggcattgccatggagatagactatgcctcttgtaaacgactgggctccagctaccga
gccctaccaaaaagttaccagcagcccaagtgtacgggacggactcctctgtgtaaagag
gttttaaatgatacctgggtttccttcccatcttggtctgaagactccacttttgttagt
tccaagaagactcaatatgaagaacatatttatcgttgtgaagatgaacgatttgagctt
gatgttgttcttgagaccaatcttgcaacaattcgggtcttagaagcaatacagaaaaaa
ctttctcgattgtctgctgaggagcaagccaaatttcgcttggataacacccttggaggc
acgtccgaagtcatccatcgaaaagcactccagaggatatatgctgacaaagcagctgat
atcatcgatggcctgaggaagaacccttccattgctgttccaattgtccttaaaaggttg
aaaatgaaagaggaagagtggcgagaagctcagagaggcttcaacaaggtctggcgagag
caaaatgagaagtactacttgaagtctttggatcaccaaggcatcaacttcaaacagaat
gacactaaggtcctgaggtctaagagcttactcaatgagatcgagagcatctacgatgag
aggcaagaacaggctacagaagagaatgctggtgtacctgttggcccacacctttctctt
gcctatgaagacaaacagatactagaagatgctgctgctctgattatccatcatgtgaag
aggcaaacaggcattcagaaagaggacaaatacaaaatcaagcaaatcatgcaccatttc
attcctgatttgctatttgctcagagaggtgatctctcagatgtggaagaagaagaagag
gaagaaatggatgtagatgaagccacaggggcacctaagaagcacaatggtgttggaggc
agcccccctaagtccaagttgttgtttagtaacacagcagctcaaaagttaagagggatg
gatgaagtatataacctgttctatgtcaataacaattggtatatctttatgcgactgcat
caaattctctgcttgaggctgctacggatttgttcccaagctgaacgacaaattgaagag
gaaaaccgagagagagaatgggagcgggaggtgctaggcataaagcgagacaagagtgat
agtccagccatacagctgcgcctcaaagaacctatggatgttgatgtagaagattattac
ccagctttcctggacatggtgcggagcctacttgatggcaacatagactcatcacaatat
gaagattcactgagagagatgttcaccattcatgcctacattgcctttactatggacaaa
ttaatccagagcatcgtcagacagctgcagcatattgtcagcgatgaggtctgtgtgcag
gttactgatctttacttggcagaaaacaataacggagccacaggaggccagctgaacagt
cagacatccaggagccttctagagtcaacgtaccagcggaaagcagagcaacttatgtca
gatgagaattgctttaagctaatgttcattcaaagtcaaggtcaagttcaactgaccatt
gagctactagacacagaagaggagaactcagatgatcccgtggaagcagagcgttggtca
gactatgtggagcgatatatgagttctgatactacttctcctgaacttcgagaacatctg
gcacagaaaccagtatttctcccaaggaatttgcggcgtatccggaagtgtcagcgtggt
cgagagcaacaggaaaaagaagggaaagaaggaaacagcaagaagaccatggagaatgta
gagagcctggacaagctggagtgtaggttcaagctgaactcctacaagatggtgtatgtg
atcaagtcggaggactacatgtaccggagaactgctctactcagagctcatcagtcccat
gagcgtgtaagcaagcgtctgcatcagcggttccaggcctgggtagataaatggaccaag
gagcatgtgccccgggaaatggcagcagagaccagcaagtggctcatgggcgaggggcta
gagggcctggtaccctgcactaccacctgtgatacagagactctgcactttgtgagcatt
aacaagtatcgtgtcaaatacggcacagtattcaaagccccttaa
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integrated database retrieval system
